RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	THAP7	Q9BT49	309 aa	Predicted RBP	11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	FAM103A1	Q9BTL3	118 aa	Known RBP	11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	SELENOI	Q9C0D9	397 aa		11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	MRPS18A	Q9NVS2	196 aa	Known RBP	11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	GAB2	Q9UQC2	676 aa		11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	RPL36	Q9Y3U8	105 aa	Known RBP	11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	LRRC42	Q9Y546	428 aa		11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	TRBV5-5	A0A0J9YX44	114 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	UBE2QL1	A1L167	161 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839		H3BUA1	57 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	MGMT	P16455	207 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	FST	P19883	344 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	MOGAT2	Q3SYC2	334 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	AWAT2	Q6E213	333 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	ZNF562	Q6V9R5	426 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	JAGN1	Q8N5M9	183 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	OR9G4	Q8NGQ1	327 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	RHOXF1	Q8NHV9	184 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839		Q96M66	194 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	TMED9	Q9BVK6	235 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	BANF2	Q9H503	90 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	PIPOX	Q9P0Z9	390 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	STEAP1	Q9UHE8	339 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	WASHC3	Q9Y3C0	194 aa		11.64	□□□□□ -0.55
AGAP3-222	ENST00000490839	C13orf42	A0A1B0GVH6	325 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839		H0YJW9	148 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	RAB29	O14966	203 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	PDCD6	O75340	191 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	CRTAP	O75718	401 aa	Predicted RBP	11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	GSTP1	P09211	210 aa	Known RBP	11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	CT45A6	P0DMU7	189 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	CT45A5	P0DMU8	189 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	CT45A7	P0DMV0	189 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	MC5R	P33032	325 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	KLF5	Q13887	457 aa	Predicted RBP	11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	HMGN3	Q15651	99 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	C6orf141	Q5SZD1	244 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	DMKN	Q6E0U4	476 aa	Predicted RBP	11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	SIGIRR	Q6IA17	410 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	LCN12	Q6JVE5	192 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	IL34	Q6ZMJ4	242 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	TMPRSS11A	Q6ZMR5	421 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	C5orf24	Q7Z6I8	188 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	POC5	Q8NA72	575 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	OR13C5	Q8NGS8	318 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	RNF5	Q99942	180 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	KRTAP17-1	Q9BYP8	105 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	RETN	Q9HD89	108 aa		11.63	□□□□□ -0.55
AGAP3-222	ENST00000490839	TRAV8-7	A0A075B6U6	113 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839		A0A0G2JLM5	398 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839		H7C2Y5	167 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	SLC22A1	O15245	554 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	ST8SIA5	O15466	376 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	OGG1	O15527	345 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	CA2	P00918	260 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839		Q499Y3	187 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	RPL39P5	Q59GN2	51 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	CDH26	Q8IXH8	852 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839		Q8N402	240 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	OR5AN1	Q8NGI8	311 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	CYYR1	Q96J86	154 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	OR14A2	Q96R54	314 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	HIPK2	Q9H2X6	1198 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	FGF20	Q9NP95	211 aa	Predicted RBP	11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	ABRACL	Q9P1F3	81 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	METTL1	Q9UBP6	276 aa	Known RBP	11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	SLC23A1	Q9UHI7	598 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	CEPT1	Q9Y6K0	416 aa		11.62	□□□□□ -0.55
AGAP3-222	ENST00000490839	SHISA3	A0PJX4	238 aa		11.61	□□□□□ -0.55
AGAP3-222	ENST00000490839	SPDEF	O95238	335 aa		11.61	□□□□□ -0.55
AGAP3-222	ENST00000490839	RASSF2	P50749	326 aa		11.61	□□□□□ -0.55
AGAP3-222	ENST00000490839	PSG5	Q15238	335 aa		11.61	□□□□□ -0.55
AGAP3-222	ENST00000490839	OR2G6	Q5TZ20	316 aa		11.61	□□□□□ -0.55
AGAP3-222	ENST00000490839	CBR4	Q8N4T8	237 aa		11.61	□□□□□ -0.55
AGAP3-222	ENST00000490839	GHSR	Q92847	366 aa		11.61	□□□□□ -0.55
AGAP3-222	ENST00000490839	CLCC1	Q96S66	551 aa		11.61	□□□□□ -0.55
AGAP3-222	ENST00000490839	ZNF355P	Q9NSJ1	428 aa		11.61	□□□□□ -0.55
AGAP3-222	ENST00000490839	BABAM2	Q9NXR7	383 aa		11.61	□□□□□ -0.55
AGAP3-222	ENST00000490839	SIGLEC8	Q9NYZ4	499 aa		11.61	□□□□□ -0.55
AGAP3-222	ENST00000490839	TRBV5-7	A0A0A0MS05	114 aa		11.6	□□□□□ -0.55
AGAP3-222	ENST00000490839	ANKRD34B	A5PLL1	514 aa		11.6	□□□□□ -0.55
AGAP3-222	ENST00000490839	BAG2	O95816	211 aa		11.6	□□□□□ -0.55
AGAP3-222	ENST00000490839	DCK	P27707	260 aa		11.6	□□□□□ -0.55
AGAP3-222	ENST00000490839	ETV1	P50549	477 aa		11.6	□□□□□ -0.55
AGAP3-222	ENST00000490839	SYNJ2BP	P57105	145 aa		11.6	□□□□□ -0.55
AGAP3-222	ENST00000490839	YIF1B	Q5BJH7	314 aa		11.6	□□□□□ -0.55
AGAP3-222	ENST00000490839	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.6	□□□□□ -0.55
AGAP3-222	ENST00000490839	GRPEL2	Q8TAA5	225 aa		11.6	□□□□□ -0.55
AGAP3-222	ENST00000490839	APH1B	Q8WW43	257 aa		11.6	□□□□□ -0.55
AGAP3-222	ENST00000490839	IL1F10	Q8WWZ1	152 aa		11.6	□□□□□ -0.55
AGAP3-222	ENST00000490839	PYDC1	Q8WXC3	89 aa		11.6	□□□□□ -0.55
AGAP3-222	ENST00000490839	TSNAX	Q99598	290 aa	Known RBP	11.6	□□□□□ -0.55
AGAP3-222	ENST00000490839	FAM110A	Q9BQ89	295 aa		11.6	□□□□□ -0.55
AGAP3-222	ENST00000490839	ITGB1BP1	O14713	200 aa		11.59	□□□□□ -0.55
AGAP3-222	ENST00000490839	CIB2	O75838	187 aa		11.59	□□□□□ -0.55
AGAP3-222	ENST00000490839	CSN3	P07498	182 aa		11.59	□□□□□ -0.55
AGAP3-222	ENST00000490839	CPE	P16870	476 aa		11.59	□□□□□ -0.55
AGAP3-222	ENST00000490839	RPS11	P62280	158 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
AGAP3-222	ENST00000490839	FXYD3	Q14802	87 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms