RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 LIME1Q9H400 295 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 OBP2BQ9NPH6 170 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 SMCO4Q9NRQ5 59 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 KCNIP1Q9NZI2 227 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 COQ3Q9NZJ6 369 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 MTCH1Q9NZJ7 389 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 FBXL17Q9UF56 701 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 SH3BGRL2Q9UJC5 107 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 OR2W1Q9Y3N9 320 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 NCKAP5O14513 1909 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 TRAV17A0A0B4J275 112 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 PGLYRP1O75594 196 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-213ENST00000490332 SCAF4O95104 1147 aaKnown RBP4.27□□□□□ -1.73
PTPRK-213ENST00000490332 LY86O95711 162 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 F10P00742 488 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 IGHG3P01860 377 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 HBE1P02100 147 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 PRH1P02810 166 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 SERPINE2P07093 398 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 CELA3AP09093 270 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 CBR1P16152 277 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 CTRB1P17538 263 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 F2RP25116 425 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 CAMLGP49069 296 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 HLA-DRB3P79483 266 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 GUCA2BQ16661 112 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 SP6Q3SY56 376 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 IGSF11Q5DX21 431 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 ZNF324BQ6AW86 544 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-213ENST00000490332 CTRB2Q6GPI1 263 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 PRSS57Q6UWY2 283 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 Q6ZRG5 221 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-213ENST00000490332 TBC1D26Q86UD7 250 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 H1FOOQ8IZA3 346 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-213ENST00000490332 SLC35G3Q8N808 338 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 C1orf162Q8NEQ5 155 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-213ENST00000490332 DMBX1Q8NFW5 382 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 FAM216AQ8WUB2 273 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 SECTM1Q8WVN6 248 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 HPSE2Q8WWQ2 592 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 LSM10Q969L4 123 aaKnown RBP4.27□□□□□ -1.73
PTPRK-213ENST00000490332 SARAFQ96BY9 339 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 NRIP2Q9BQI9 281 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 CABLES2Q9BTV7 478 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 DEFB127Q9H1M4 99 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 HIPK2Q9H2X6 1198 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 TMPRSS5Q9H3S3 457 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 ZNF552Q9H707 407 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-213ENST00000490332 TUBA4BQ9H853 241 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 ZDHHC11Q9H8X9 412 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 SEBOXQ9HB31 216 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-213ENST00000490332 LYRM2Q9NU23 88 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-213ENST00000490332 PRR13Q9NZ81 148 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 CACFD1Q9UGQ2 172 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 RNF150Q9ULK6 438 aa4.27□□□□□ -1.73
PTPRK-213ENST00000490332 RCL1Q9Y2P8 373 aaKnown RBP4.27□□□□□ -1.73
PTPRK-213ENST00000490332 EPPK1P58107 5090 aaKnown RBP4.26□□□□□ -1.73
PTPRK-213ENST00000490332 NKX2-6A6NCS4 301 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 IQCF6A8MYZ5 107 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 AHRRA9YTQ3 701 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 FAM90A26D6RGX4 464 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.26□□□□□ -1.73
PTPRK-213ENST00000490332 AQP7O14520 342 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 PITX3O75364 302 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 NGFP01138 241 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 IFNA5P01569 189 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 SCTP09683 121 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 OR8U9P0C7N5 309 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 ZNF44P15621 663 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 MUC1P15941 1255 aaPredicted RBP4.26□□□□□ -1.73
PTPRK-213ENST00000490332 LMO1P25800 156 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 PAX6P26367 422 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 SNCAP37840 140 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 RFC3P40938 356 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 LPAR6P43657 344 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 TNFSF10P50591 281 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 ARHGDIBP52566 201 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 TAS2R30P59541 319 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 PPP1CBP62140 327 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 EWSR1Q01844 656 aaKnown RBP eCLIP4.26□□□□□ -1.73
PTPRK-213ENST00000490332 KRTAP1-1Q07627 177 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 ZNF146Q15072 292 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 GUK1Q16774 197 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 RNF212Q495C1 297 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 ACSF3Q4G176 576 aaPredicted RBP4.26□□□□□ -1.73
PTPRK-213ENST00000490332 SMUG1Q53HV7 270 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 Q5PR19 223 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 C9orf135Q5VTT2 229 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 OR2T2Q6IF00 324 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 Q6P435 159 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 TRAT1Q6PIZ9 186 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 ATRAIDQ6UW56 229 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 IGFL2Q6UWQ7 119 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 Q6ZT83 130 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 MDP1Q86V88 176 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 STX12Q86Y82 276 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 FAM219AQ8IW50 185 aa4.26□□□□□ -1.73
PTPRK-213ENST00000490332 PUSL1Q8N0Z8 303 aaKnown RBP4.26□□□□□ -1.73
PTPRK-213ENST00000490332 LRRC75A-AS1Q8N1F1 130 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms