RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 RANBP1P43487 201 aa19.66■□□□□ 0.74
HMGN1-217ENST00000489072 RPL39P5Q59GN2 51 aa19.66■□□□□ 0.74
HMGN1-217ENST00000489072 YTHDF1Q9BYJ9 559 aaKnown RBP19.66■□□□□ 0.74
HMGN1-217ENST00000489072 IGKV1-6A0A0C4DH72 117 aa19.65■□□□□ 0.74
HMGN1-217ENST00000489072 ACTBP60709 375 aa19.65■□□□□ 0.74
HMGN1-217ENST00000489072 SLC35B1P78383 322 aa19.65■□□□□ 0.74
HMGN1-217ENST00000489072 MMDQ15546 238 aa19.65■□□□□ 0.74
HMGN1-217ENST00000489072 ETV3LQ6ZN32 361 aa19.65■□□□□ 0.74
HMGN1-217ENST00000489072 ABHD14BQ96IU4 210 aa19.65■□□□□ 0.74
HMGN1-217ENST00000489072 AGMATQ9BSE5 352 aa19.65■□□□□ 0.74
HMGN1-217ENST00000489072 MGAT4AQ9UM21 535 aa19.65■□□□□ 0.74
HMGN1-217ENST00000489072 SMIM30A4D0T7 59 aa19.64■□□□□ 0.73
HMGN1-217ENST00000489072 SLC2A2P11168 524 aaPredicted RBP19.64■□□□□ 0.73
HMGN1-217ENST00000489072 IGLL1P15814 213 aa19.64■□□□□ 0.73
HMGN1-217ENST00000489072 SOX6P35712 828 aa19.64■□□□□ 0.73
HMGN1-217ENST00000489072 CEACAM6P40199 344 aa19.64■□□□□ 0.73
HMGN1-217ENST00000489072 FAM71F2Q6NXP2 309 aa19.64■□□□□ 0.73
HMGN1-217ENST00000489072 COMMD1Q8N668 190 aa19.64■□□□□ 0.73
HMGN1-217ENST00000489072 FCGR1BQ92637 280 aa19.64■□□□□ 0.73
HMGN1-217ENST00000489072 PHF21AQ96BD5 680 aa19.64■□□□□ 0.73
HMGN1-217ENST00000489072 RAB3CQ96E17 227 aa19.64■□□□□ 0.73
HMGN1-217ENST00000489072 C11orf54Q9H0W9 315 aaPredicted RBP19.64■□□□□ 0.73
HMGN1-217ENST00000489072 TXNL4BQ9NX01 149 aaKnown RBP19.64■□□□□ 0.73
HMGN1-217ENST00000489072 PIPOXQ9P0Z9 390 aa19.64■□□□□ 0.73
HMGN1-217ENST00000489072 ITGB1BP1O14713 200 aa19.63■□□□□ 0.73
HMGN1-217ENST00000489072 RAB29O14966 203 aa19.63■□□□□ 0.73
HMGN1-217ENST00000489072 ZBTB25P24278 435 aa19.63■□□□□ 0.73
HMGN1-217ENST00000489072 RAB27BO00194 218 aa19.62■□□□□ 0.73
HMGN1-217ENST00000489072 HSPA12AO43301 675 aa19.62■□□□□ 0.73
HMGN1-217ENST00000489072 CT45A6P0DMU7 189 aa19.62■□□□□ 0.73
HMGN1-217ENST00000489072 CT45A5P0DMU8 189 aa19.62■□□□□ 0.73
HMGN1-217ENST00000489072 CT45A7P0DMV0 189 aa19.62■□□□□ 0.73
HMGN1-217ENST00000489072 RAB6AP20340 208 aa19.62■□□□□ 0.73
HMGN1-217ENST00000489072 FGF9P31371 208 aaPredicted RBP19.62■□□□□ 0.73
HMGN1-217ENST00000489072 CFHR3Q02985 330 aa19.62■□□□□ 0.73
HMGN1-217ENST00000489072 PNLIPRP3Q17RR3 467 aa19.62■□□□□ 0.73
HMGN1-217ENST00000489072 TEX38Q6PEX7 206 aa19.62■□□□□ 0.73
HMGN1-217ENST00000489072 ZNF773Q6PK81 442 aa19.62■□□□□ 0.73
HMGN1-217ENST00000489072 FAM131AQ6UXB0 335 aa19.62■□□□□ 0.73
HMGN1-217ENST00000489072 LCNL1Q6ZST4 164 aa19.62■□□□□ 0.73
HMGN1-217ENST00000489072 OR10R2Q8NGX6 335 aa19.62■□□□□ 0.73
HMGN1-217ENST00000489072 ZFP57Q9NU63 452 aa19.62■□□□□ 0.73
HMGN1-217ENST00000489072 ZNF107Q9UII5 783 aaPredicted RBP19.62■□□□□ 0.73
HMGN1-217ENST00000489072 TRDCB7Z8K6 153 aa19.61■□□□□ 0.73
HMGN1-217ENST00000489072 CD3GP09693 182 aa19.61■□□□□ 0.73
HMGN1-217ENST00000489072 GLDNQ6ZMI3 551 aaPredicted RBP19.61■□□□□ 0.73
HMGN1-217ENST00000489072 C8orf86Q6ZUL3 223 aa19.61■□□□□ 0.73
HMGN1-217ENST00000489072 LINC00482Q8N8I6 264 aa19.61■□□□□ 0.73
HMGN1-217ENST00000489072 EDARADDQ8WWZ3 215 aa19.61■□□□□ 0.73
HMGN1-217ENST00000489072 PTX4Q96A99 478 aa19.61■□□□□ 0.73
HMGN1-217ENST00000489072 STUB1Q9UNE7 303 aa19.61■□□□□ 0.73
HMGN1-217ENST00000489072 MFNGO00587 321 aa19.6■□□□□ 0.73
HMGN1-217ENST00000489072 NBR2O15453 112 aa19.6■□□□□ 0.73
HMGN1-217ENST00000489072 PROP1O75360 226 aa19.6■□□□□ 0.73
HMGN1-217ENST00000489072 IGF1P05019 195 aa19.6■□□□□ 0.73
HMGN1-217ENST00000489072 RPLP1P05386 114 aaKnown RBP19.6■□□□□ 0.73
HMGN1-217ENST00000489072 FCGR3AP08637 254 aa19.6■□□□□ 0.73
HMGN1-217ENST00000489072 GNB3P16520 340 aa19.6■□□□□ 0.73
HMGN1-217ENST00000489072 KLHL30-AS1Q8NEE0 82 aa19.6■□□□□ 0.73
HMGN1-217ENST00000489072 NPBQ8NG41 125 aa19.6■□□□□ 0.73
HMGN1-217ENST00000489072 GON7Q9BXV9 100 aa19.6■□□□□ 0.73
HMGN1-217ENST00000489072 RNF150Q9ULK6 438 aa19.6■□□□□ 0.73
HMGN1-217ENST00000489072 A0A075B6Q4 140 aa19.59■□□□□ 0.73
HMGN1-217ENST00000489072 NUDT19A8MXV4 375 aa19.59■□□□□ 0.73
HMGN1-217ENST00000489072 RRP9O43818 475 aaKnown RBP19.59■□□□□ 0.73
HMGN1-217ENST00000489072 HIST1H1DP16402 221 aaKnown RBP19.59■□□□□ 0.73
HMGN1-217ENST00000489072 THBS3P49746 956 aa19.59■□□□□ 0.73
HMGN1-217ENST00000489072 C5orf64Q2M2E5 130 aa19.59■□□□□ 0.73
HMGN1-217ENST00000489072 FOXB2Q5VYV0 432 aa19.59■□□□□ 0.73
HMGN1-217ENST00000489072 MRPL41Q8IXM3 137 aaKnown RBP19.59■□□□□ 0.73
HMGN1-217ENST00000489072 ZNF580Q9UK33 172 aa19.59■□□□□ 0.73
HMGN1-217ENST00000489072 H0YJW9 148 aa19.58■□□□□ 0.72
HMGN1-217ENST00000489072 NDUFA3O95167 84 aa19.58■□□□□ 0.72
HMGN1-217ENST00000489072 HLA-DRB1P01911 266 aa19.58■□□□□ 0.72
HMGN1-217ENST00000489072 GADD45AP24522 165 aa19.58■□□□□ 0.72
HMGN1-217ENST00000489072 MRPS15P82914 257 aaKnown RBP19.58■□□□□ 0.72
HMGN1-217ENST00000489072 FOXE3Q13461 319 aa19.58■□□□□ 0.72
HMGN1-217ENST00000489072 ZNF695Q8IW36 515 aa19.58■□□□□ 0.72
HMGN1-217ENST00000489072 RNF152Q8N8N0 203 aa19.58■□□□□ 0.72
HMGN1-217ENST00000489072 OR4A4PQ8NGN8 299 aa19.58■□□□□ 0.72
HMGN1-217ENST00000489072 MAFIPQ8WZ33 124 aa19.58■□□□□ 0.72
HMGN1-217ENST00000489072 OR51E2Q9H255 320 aa19.58■□□□□ 0.72
HMGN1-217ENST00000489072 GHITMQ9H3K2 345 aa19.58■□□□□ 0.72
HMGN1-217ENST00000489072 NECAP2Q9NVZ3 263 aa19.58■□□□□ 0.72
HMGN1-217ENST00000489072 RDH8Q9NYR8 311 aa19.58■□□□□ 0.72
HMGN1-217ENST00000489072 IGHV7-81A0A0B4J1V7 117 aa19.57■□□□□ 0.72
HMGN1-217ENST00000489072 OR5H14A6NHG9 310 aa19.57■□□□□ 0.72
HMGN1-217ENST00000489072 NOTOA8MTQ0 251 aa19.57■□□□□ 0.72
HMGN1-217ENST00000489072 FABP7O15540 132 aa19.57■□□□□ 0.72
HMGN1-217ENST00000489072 IGHG4P01861 327 aa19.57■□□□□ 0.72
HMGN1-217ENST00000489072 VDAC1P21796 283 aa19.57■□□□□ 0.72
HMGN1-217ENST00000489072 IGSF11Q5DX21 431 aa19.57■□□□□ 0.72
HMGN1-217ENST00000489072 OR5AN1Q8NGI8 311 aa19.57■□□□□ 0.72
HMGN1-217ENST00000489072 RCC1LQ96I51 464 aaKnown RBP19.57■□□□□ 0.72
HMGN1-217ENST00000489072 KCTD7Q96MP8 289 aa19.57■□□□□ 0.72
HMGN1-217ENST00000489072 TOLLIPQ9H0E2 274 aa19.57■□□□□ 0.72
HMGN1-217ENST00000489072 ZNF230Q9UIE0 474 aaPredicted RBP19.57■□□□□ 0.72
HMGN1-217ENST00000489072 SSR3Q9UNL2 185 aa19.57■□□□□ 0.72
HMGN1-217ENST00000489072 METTL21EPA6NDL7 271 aa19.56■□□□□ 0.72
HMGN1-217ENST00000489072 ATP6V0E1O15342 81 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms