RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 ADORA1P30542 326 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 GRPRP30550 384 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 LINC00313P59037 77 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 RAB8AP61006 207 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 GTF2BQ00403 316 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 XRCC4Q13426 336 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 OR4D1Q15615 310 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 TMEM249Q2WGJ8 235 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 DNAL1Q4LDG9 190 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 TTC33Q6PID6 262 aaPredicted RBP0.96□□□□□ -2.26
PTPN4-212ENST00000488896 Q6ZRN7 208 aaPredicted RBP0.96□□□□□ -2.26
PTPN4-212ENST00000488896 BOD1L2Q8IYS8 172 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 OR4X1Q8NH49 305 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 OR5K1Q8NHB7 308 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 RNASEH2CQ8TDP1 164 aaKnown RBP0.96□□□□□ -2.26
PTPN4-212ENST00000488896 TRNT1Q96Q11 434 aaKnown RBP0.96□□□□□ -2.26
PTPN4-212ENST00000488896 HBEGFQ99075 208 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 MED18Q9BUE0 208 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 ZNF471Q9BX82 626 aaPredicted RBP0.96□□□□□ -2.26
PTPN4-212ENST00000488896 BBS2Q9BXC9 721 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 MS4A12Q9NXJ0 267 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 COMMD9Q9P000 198 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 LINC00527Q9UJ94 153 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 ALG5Q9Y673 324 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 KIAA0232Q92628 1395 aa0.96□□□□□ -2.26
PTPN4-212ENST00000488896 CCDC88CQ9P219 2028 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 IGLV3-9A0A075B6K5 115 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 MDFIC2A0A1B0GVS7 189 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 C11orf86A6NJI1 115 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 CDK2P24941 298 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 PEBP1P30086 187 aaKnown RBP0.95□□□□□ -2.26
PTPN4-212ENST00000488896 KDELR2P33947 212 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 CDK9P50750 372 aaKnown RBP0.95□□□□□ -2.26
PTPN4-212ENST00000488896 FGF12P61328 243 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 SKP1P63208 163 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 SYCP1Q15431 976 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 USF2Q15853 346 aaPredicted RBP0.95□□□□□ -2.26
PTPN4-212ENST00000488896 CRLF3Q8IUI8 442 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 OR4X2Q8NGF9 303 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 TAMM41Q96BW9 452 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 ACBD6Q9BR61 282 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 DCUN1D5Q9BTE7 237 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 UPF3BQ9BZI7 483 aaKnown RBP0.95□□□□□ -2.26
PTPN4-212ENST00000488896 PRO2289Q9P1D8 64 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 CD300AQ9UGN4 299 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 DNAJC12Q9UKB3 198 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.95□□□□□ -2.26
PTPN4-212ENST00000488896 RTEL1-TNFRSF6BF6WH68 1400 aa0.95□□□□□ -2.26
PTPN4-212ENST00000488896 CLUHO75153 1309 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 PTPRBP23467 1997 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 CHD5Q8TDI0 1954 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 LINC00862A6NCI5 91 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 F8VZ95 297 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 H3BPC8 53 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 PHYHO14832 338 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 ZW10O43264 779 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 STK16O75716 305 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 ARL6IP5O75915 188 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 GPX1P07203 203 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 F8A1P23610 371 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 OR1E2P47887 323 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 DAPP51397 102 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 ZNHIT3Q15649 155 aaPredicted RBP0.94□□□□□ -2.26
PTPN4-212ENST00000488896 AGTRAPQ6RW13 159 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 C2orf91Q6ZV80 131 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 PLCZ1Q86YW0 608 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 DYNC2LI1Q8TCX1 351 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 TNFAIP8L1Q8WVP5 186 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 LRRC45Q96CN5 670 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 ABHD14BQ96IU4 210 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 HSPB9Q9BQS6 159 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 C7orf50Q9BRJ6 194 aaKnown RBP0.94□□□□□ -2.26
PTPN4-212ENST00000488896 TMEM208Q9BTX3 173 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 TIMM21Q9BVV7 248 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 NRBP2Q9NSY0 501 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 NDUFB11Q9NX14 153 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 PSMD13Q9UNM6 376 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 SDK1Q7Z5N4 2213 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 NUMA1Q14980 2115 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 KIAA2026Q5HYC2 2103 aa0.94□□□□□ -2.26
PTPN4-212ENST00000488896 ARRDC5A6NEK1 342 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 METTL15A6NJ78 407 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 F5H5K5 113 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 M0QX08 132 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 M0QYV0 167 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 LIN7AO14910 233 aaPredicted RBP0.93□□□□□ -2.26
PTPN4-212ENST00000488896 GNRH2O43555 120 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 CALUO43852 315 aaPredicted RBP0.93□□□□□ -2.26
PTPN4-212ENST00000488896 UGT2B11O75310 529 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 NDUFS6O75380 124 aaKnown RBP0.93□□□□□ -2.26
PTPN4-212ENST00000488896 OR13C7P0DN81 318 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 CCL3P10147 92 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 CRHBPP24387 322 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 CRYBB3P26998 211 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 SERPINB10P48595 397 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 TPM4P67936 248 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 DMTNQ08495 405 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 C1DQ13901 141 aaKnown RBP0.93□□□□□ -2.26
PTPN4-212ENST00000488896 MESTQ5EB52 335 aa0.93□□□□□ -2.26
PTPN4-212ENST00000488896 RBM48Q5RL73 367 aaKnown RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms