RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ATG5Q9H1Y0 275 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 NCBP2LA6PVI3 153 aaKnown RBP12.61□□□□□ -0.39
CTDSP1-209ENST00000488627 OR8H1Q8NGG4 311 aa12.61□□□□□ -0.39
CTDSP1-209ENST00000488627 S1PR3Q99500 378 aa12.61□□□□□ -0.39
CTDSP1-209ENST00000488627 ABCG5Q9H222 651 aa12.61□□□□□ -0.39
CTDSP1-209ENST00000488627 LIN7CQ9NUP9 197 aaKnown RBP12.61□□□□□ -0.39
CTDSP1-209ENST00000488627 PIPOXQ9P0Z9 390 aa12.61□□□□□ -0.39
CTDSP1-209ENST00000488627 A0A075B6Q4 140 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 RAB29O14966 203 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 FABP7O15540 132 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 GSTT2P0CG29 244 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 GSTT2BP0CG30 244 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 CT45A6P0DMU7 189 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 CT45A5P0DMU8 189 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 CT45A7P0DMV0 189 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 SRSF7Q16629 238 aaKnown RBP eCLIP12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 CDNFQ49AH0 187 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 RPL39P5Q59GN2 51 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 FAM71F2Q6NXP2 309 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 FAM71E2Q8N5Q1 922 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 OR4A4PQ8NGN8 299 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 OR5H6Q8NGV6 325 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 LGALS14Q8TCE9 139 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 ABHD14BQ96IU4 210 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 NOL4LQ96MY1 436 aaPredicted RBP12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 CABLES2Q9BTV7 478 aa12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 ZNF230Q9UIE0 474 aaPredicted RBP12.6□□□□□ -0.39
CTDSP1-209ENST00000488627 IGKV1D-8A0A087WSZ0 117 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 HSPA12AO43301 675 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 OPN1MWP04001 364 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 OPN1MW2P0DN77 364 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 OPN1MW3P0DN78 364 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 TGFBR1P36897 503 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 SCAND1P57086 179 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 NSUN5P1Q3KNT7 163 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 IGSF11Q5DX21 431 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 Q6ZS49 121 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 SLC35E3Q7Z769 313 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 MAFIPQ8WZ33 124 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 GHITMQ9H3K2 345 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 RDH8Q9NYR8 311 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 RNF150Q9ULK6 438 aa12.59□□□□□ -0.39
CTDSP1-209ENST00000488627 TRBV6-7A0A0A0MS04 114 aa12.58□□□□□ -0.4
CTDSP1-209ENST00000488627 DIRAS3O95661 229 aa12.58□□□□□ -0.4
CTDSP1-209ENST00000488627 GPR12P47775 334 aa12.58□□□□□ -0.4
CTDSP1-209ENST00000488627 MRPS15P82914 257 aaKnown RBP12.58□□□□□ -0.4
CTDSP1-209ENST00000488627 KIR2DS1Q14954 304 aa12.58□□□□□ -0.4
CTDSP1-209ENST00000488627 ARL6IP1Q15041 203 aa12.58□□□□□ -0.4
CTDSP1-209ENST00000488627 TIMM50Q3ZCQ8 353 aa12.58□□□□□ -0.4
CTDSP1-209ENST00000488627 ZNF260Q3ZCT1 412 aa12.58□□□□□ -0.4
CTDSP1-209ENST00000488627 IDNKQ5T6J7 187 aa12.58□□□□□ -0.4
CTDSP1-209ENST00000488627 HACD4Q5VWC8 232 aa12.58□□□□□ -0.4
CTDSP1-209ENST00000488627 ZNF329Q86UD4 541 aa12.58□□□□□ -0.4
CTDSP1-209ENST00000488627 EDARADDQ8WWZ3 215 aa12.58□□□□□ -0.4
CTDSP1-209ENST00000488627 SLC25A38Q96DW6 304 aa12.58□□□□□ -0.4
CTDSP1-209ENST00000488627 LINC00527Q9UJ94 153 aa12.58□□□□□ -0.4
CTDSP1-209ENST00000488627 PSMB11A5LHX3 300 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 H0YJW9 148 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 AIREO43918 545 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 DTYMKP23919 212 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 CNTFRP26992 372 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 SERPINB10P48595 397 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 LINC00205P59089 165 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 ACTBP60709 375 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 ARFRP1Q13795 201 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 STPG2Q8N412 459 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 OR5AN1Q8NGI8 311 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 CHPT1Q8WUD6 406 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 RASL11BQ9BPW5 248 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 HSPB9Q9BQS6 159 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 VCX3AQ9NNX9 186 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 RHBDL2Q9NX52 303 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 ETV7Q9Y603 341 aa12.57□□□□□ -0.4
CTDSP1-209ENST00000488627 TET2Q6N021 2002 aaPredicted RBP12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 MEGF8Q7Z7M0 2845 aa12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 TCRBV4S1A1TA0A5B7 111 aa12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 BET1O15155 118 aa12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 SSX5O60225 188 aa12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 SCGNO76038 276 aa12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 GSTP1P09211 210 aaKnown RBP12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 SMIM18P0DKX4 95 aa12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 RPS19P39019 145 aaKnown RBP12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 MMDQ15546 238 aa12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 GLDNQ6ZMI3 551 aaPredicted RBP12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 NPBQ8NG41 125 aa12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 OR4X2Q8NGF9 303 aa12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 PHF21AQ96BD5 680 aa12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 R3HDM4Q96D70 268 aa12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 GAB2Q9UQC2 676 aa12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 TSSC4Q9Y5U2 329 aaPredicted RBP12.56□□□□□ -0.4
CTDSP1-209ENST00000488627 A0A1W2PRX2 142 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 TMEM235A6NFC5 223 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 OR5H14A6NHG9 310 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 AP4M1O00189 453 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 TMEM127O75204 238 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 SOX6P35712 828 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 TALDO1P37837 337 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 LSM3P62310 102 aaKnown RBP12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 FAM131AQ6UXB0 335 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms