RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 B9D2Q9BPU9 175 aa17.64■□□□□ 0.41
PTPN4-211ENST00000488279 LPAR5Q9H1C0 372 aa17.64■□□□□ 0.41
PTPN4-211ENST00000488279 GHITMQ9H3K2 345 aa17.64■□□□□ 0.41
PTPN4-211ENST00000488279 DUSP21Q9H596 190 aa17.64■□□□□ 0.41
PTPN4-211ENST00000488279 PARP11Q9NR21 331 aa17.64■□□□□ 0.41
PTPN4-211ENST00000488279 IGHV7-81A0A0B4J1V7 117 aa17.63■□□□□ 0.41
PTPN4-211ENST00000488279 G3V318 75 aa17.63■□□□□ 0.41
PTPN4-211ENST00000488279 ATP6V0E1O15342 81 aa17.63■□□□□ 0.41
PTPN4-211ENST00000488279 LUMP51884 338 aaPredicted RBP17.63■□□□□ 0.41
PTPN4-211ENST00000488279 P2RY14Q15391 338 aa17.63■□□□□ 0.41
PTPN4-211ENST00000488279 TMEM91Q6ZNR0 172 aa17.63■□□□□ 0.41
PTPN4-211ENST00000488279 FAM89BQ8N5H3 189 aa17.63■□□□□ 0.41
PTPN4-211ENST00000488279 OR11H1Q8NG94 326 aa17.63■□□□□ 0.41
PTPN4-211ENST00000488279 MYOZ3Q8TDC0 251 aa17.63■□□□□ 0.41
PTPN4-211ENST00000488279 KLK15Q9H2R5 256 aa17.63■□□□□ 0.41
PTPN4-211ENST00000488279 ISYNA1Q9NPH2 558 aa17.63■□□□□ 0.41
PTPN4-211ENST00000488279 TRBV6-6A0A0A6YYG2 114 aa17.62■□□□□ 0.41
PTPN4-211ENST00000488279 TRAV41A0A0B4J266 112 aa17.62■□□□□ 0.41
PTPN4-211ENST00000488279 SLC17A2O00624 439 aa17.62■□□□□ 0.41
PTPN4-211ENST00000488279 SOCS1O15524 211 aa17.62■□□□□ 0.41
PTPN4-211ENST00000488279 RGS10O43665 173 aa17.62■□□□□ 0.41
PTPN4-211ENST00000488279 ARL6IP5O75915 188 aa17.62■□□□□ 0.41
PTPN4-211ENST00000488279 IGLV1-40P01703 118 aa17.62■□□□□ 0.41
PTPN4-211ENST00000488279 PSMA1P25786 263 aaKnown RBP17.62■□□□□ 0.41
PTPN4-211ENST00000488279 NRG4Q8WWG1 115 aa17.62■□□□□ 0.41
PTPN4-211ENST00000488279 AK3Q9UIJ7 227 aa17.62■□□□□ 0.41
PTPN4-211ENST00000488279 MGAT4AQ9UM21 535 aa17.62■□□□□ 0.41
PTPN4-211ENST00000488279 VSIG4Q9Y279 399 aa17.62■□□□□ 0.41
PTPN4-211ENST00000488279 AK6Q9Y3D8 172 aaKnown RBP17.62■□□□□ 0.41
PTPN4-211ENST00000488279 SEC14L6B5MCN3 397 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 ITGB1BP1O14713 200 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 NDUFA3O95167 84 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 CT45A6P0DMU7 189 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 CT45A5P0DMU8 189 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 CT45A7P0DMV0 189 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 ZBTB25P24278 435 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 MC5RP33032 325 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 CEACAM6P40199 344 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 RPS25P62851 125 aaKnown RBP17.61■□□□□ 0.41
PTPN4-211ENST00000488279 FHL3Q13643 280 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 KIAA0141Q14154 515 aaPredicted RBP17.61■□□□□ 0.41
PTPN4-211ENST00000488279 RAB11BQ15907 218 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 RPL39P5Q59GN2 51 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 C11orf87Q6NUJ2 197 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 FAM131AQ6UXB0 335 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 ZNF491Q8N8L2 437 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 GFI1Q99684 422 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 CCDC90BQ9GZT6 254 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 HSF4Q9ULV5 492 aa17.61■□□□□ 0.41
PTPN4-211ENST00000488279 DNAH9Q9NYC9 4486 aa17.6■□□□□ 0.41
PTPN4-211ENST00000488279 OR5H14A6NHG9 310 aa17.6■□□□□ 0.41
PTPN4-211ENST00000488279 HSPA12AO43301 675 aa17.6■□□□□ 0.41
PTPN4-211ENST00000488279 GSTP1P09211 210 aaKnown RBP17.6■□□□□ 0.41
PTPN4-211ENST00000488279 CPEP16870 476 aa17.6■□□□□ 0.41
PTPN4-211ENST00000488279 RANBP1P43487 201 aa17.6■□□□□ 0.41
PTPN4-211ENST00000488279 RAB9AP51151 201 aa17.6■□□□□ 0.41
PTPN4-211ENST00000488279 MLLT11Q13015 90 aaPredicted RBP17.6■□□□□ 0.41
PTPN4-211ENST00000488279 ZNF660Q6AZW8 331 aaPredicted RBP17.6■□□□□ 0.41
PTPN4-211ENST00000488279 MINDY2Q8NBR6 621 aa17.6■□□□□ 0.41
PTPN4-211ENST00000488279 OR1N2Q8NGR9 330 aa17.6■□□□□ 0.41
PTPN4-211ENST00000488279 EDARADDQ8WWZ3 215 aa17.6■□□□□ 0.41
PTPN4-211ENST00000488279 ABHD14BQ96IU4 210 aa17.6■□□□□ 0.41
PTPN4-211ENST00000488279 AGMATQ9BSE5 352 aa17.6■□□□□ 0.41
PTPN4-211ENST00000488279 HDHD3Q9BSH5 251 aaPredicted RBP17.6■□□□□ 0.41
PTPN4-211ENST00000488279 GNB4Q9HAV0 340 aa17.6■□□□□ 0.41
PTPN4-211ENST00000488279 SCOCQ9UIL1 159 aa17.6■□□□□ 0.41
PTPN4-211ENST00000488279 H7C2Y5 167 aa17.59■□□□□ 0.41
PTPN4-211ENST00000488279 I3L521 148 aa17.59■□□□□ 0.41
PTPN4-211ENST00000488279 RRHO14718 337 aa17.59■□□□□ 0.41
PTPN4-211ENST00000488279 OR8U8P0C7N1 319 aa17.59■□□□□ 0.41
PTPN4-211ENST00000488279 VEGFCP49767 419 aa17.59■□□□□ 0.41
PTPN4-211ENST00000488279 HLA-DRB3P79483 266 aa17.59■□□□□ 0.41
PTPN4-211ENST00000488279 RUNX1Q01196 453 aa17.59■□□□□ 0.41
PTPN4-211ENST00000488279 PLGLAQ15195 96 aa17.59■□□□□ 0.41
PTPN4-211ENST00000488279 PARP12Q9H0J9 701 aaKnown RBP17.59■□□□□ 0.41
PTPN4-211ENST00000488279 C11orf54Q9H0W9 315 aaPredicted RBP17.59■□□□□ 0.41
PTPN4-211ENST00000488279 H0YJW9 148 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 CALRP27797 417 aaKnown RBP17.58■□□□□ 0.4
PTPN4-211ENST00000488279 ECI1P42126 302 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 PSMD7P51665 324 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 TMEM50BP56557 158 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 ZNF260Q3ZCT1 412 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 GLDNQ6ZMI3 551 aaPredicted RBP17.58■□□□□ 0.4
PTPN4-211ENST00000488279 PRSS48Q7RTY5 328 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 ARHGAP5-AS1Q96IT6 56 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 OR5B12Q96R08 314 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 MGLLQ99685 303 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 RNF5Q99942 180 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 FBXL15Q9H469 300 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 Q9N2K0 584 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 C12orf4Q9NQ89 552 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 OR1A1Q9P1Q5 309 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 WASHC3Q9Y3C0 194 aa17.58■□□□□ 0.4
PTPN4-211ENST00000488279 FOXI3A8MTJ6 420 aaPredicted RBP17.57■□□□□ 0.4
PTPN4-211ENST00000488279 RBBP9O75884 186 aa17.57■□□□□ 0.4
PTPN4-211ENST00000488279 SCTP09683 121 aa17.57■□□□□ 0.4
PTPN4-211ENST00000488279 CRHBPP24387 322 aa17.57■□□□□ 0.4
PTPN4-211ENST00000488279 CX3CL1P78423 397 aa17.57■□□□□ 0.4
PTPN4-211ENST00000488279 ZNF616Q08AN1 781 aa17.57■□□□□ 0.4
PTPN4-211ENST00000488279 ECSCRQ19T08 205 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms