RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 AQP1P29972 269 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 PRDX2P32119 198 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 RBM34P42696 430 aaKnown RBP3.24□□□□□ -1.89
BRCA1-217ENST00000487825 GPR4P46093 362 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 RAB9AP51151 201 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 EDDM3BP56851 147 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 ACTR3P61158 418 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 FAM3AP98173 230 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 MEF2CQ06413 473 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-217ENST00000487825 FADDQ13158 208 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 EBI3Q14213 229 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 RGNQ15493 299 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 SMIM21Q3B7S5 101 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 REG3GQ6UW15 175 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 DRAM2Q6UX65 266 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 IL34Q6ZMJ4 242 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 FAM122BQ7Z309 247 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 SLC35F6Q8N357 371 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 Q8N6K4 173 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 UXS1Q8NBZ7 420 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 OR4C15Q8NGM1 316 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 OR5P3Q8WZ94 311 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 FRZBQ92765 325 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 ZIM3Q96PE6 472 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 NEDD4LQ96PU5 975 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 SYT4Q9H2B2 425 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 WDR55Q9H6Y2 383 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-217ENST00000487825 ZNF286AQ9HBT8 521 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 ABCB9Q9NP78 766 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 RASL12Q9NYN1 266 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 MRM2Q9UI43 246 aaKnown RBP3.24□□□□□ -1.89
BRCA1-217ENST00000487825 CELA1Q9UNI1 258 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 LINC00312Q9Y6C7 94 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 A0A075B6Q4 140 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 LOC102724200A0A096LPH7 203 aaPredicted RBP3.23□□□□□ -1.89
BRCA1-217ENST00000487825 TRAV24A0A0B4J272 114 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 C13orf42A0A1B0GVH6 325 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 hADV38S2A0JD32 116 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 FAM183AA6NL82 134 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 ZNF850A8MQ14 1090 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 DLGAP1O14490 977 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 XKRYO14609 159 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 MPZL2O60487 215 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 ZNF737O75373 536 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 RLN1P04808 185 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 TROVE2P10155 538 aaKnown RBP eCLIP3.23□□□□□ -1.89
BRCA1-217ENST00000487825 IL12AP29459 219 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 NPBWR2P48146 333 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 SLC7A2P52569 658 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 NDUFV3P56181 108 aaKnown RBP3.23□□□□□ -1.89
BRCA1-217ENST00000487825 CDK6Q00534 326 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 RAB40BQ12829 278 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 BNIP1Q12981 228 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 SNCBQ16143 134 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 DEFB135Q30KP9 77 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 KLHL12Q53G59 568 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 C1orf134Q5TEV5 83 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 OR52W1Q6IF63 320 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 REEP3Q6NUK4 255 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 GDPD3Q7L5L3 318 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 RBM45Q8IUH3 476 aaKnown RBP3.23□□□□□ -1.89
BRCA1-217ENST00000487825 SERPINA12Q8IW75 414 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 LYPD1Q8N2G4 141 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 FTMTQ8N4E7 242 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 GPR32P1Q8NGA4 272 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 OR4D11Q8NGI4 311 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 OR9G4Q8NGQ1 327 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 OR2K2Q8NGT1 345 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 OR52J3Q8NH60 311 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 RHOXF1Q8NHV9 184 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 TMEM239Q8WW34 195 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 SPTSSAQ969W0 71 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 RPEQ96AT9 228 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 Q96M85 177 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 PKIBQ9C010 78 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 VCX2Q9H322 139 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 OR51I2Q9H344 312 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 RERGLQ9H628 205 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 CYB5R1Q9UHQ9 305 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 SIGLEC7Q9Y286 467 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 RHBDD3Q9Y3P4 386 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 MPC1Q9Y5U8 109 aa3.23□□□□□ -1.89
BRCA1-217ENST00000487825 PKHD1L1Q86WI1 4243 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 FAT3Q8TDW7 4589 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 TRAV27A0A087WT01 109 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 NCBP2LA6PVI3 153 aaKnown RBP3.22□□□□□ -1.89
BRCA1-217ENST00000487825 C11orf94C9JXX5 98 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 G3V318 75 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 DCTN6O00399 190 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 SERPINB7O75635 380 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 ANP32DO95626 131 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 CST4P01036 141 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 CD14P08571 375 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 P0DMU3 169 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 FAM231AP0DMU4 169 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 FAM231CP0DMU5 169 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 SLC2A1P11166 492 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 CTRB1P17538 263 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 NUP62P37198 522 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-217ENST00000487825 GPM6AP51674 278 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms