RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 ST8SIA5O15466 376 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 CA11O75493 328 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 CA2P00918 260 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 TRBV12-3P01733 135 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 TRGV3P03979 118 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 MAS1P04201 325 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 CD2P06729 351 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 FCGR1AP12314 374 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 ZP3P21754 424 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 SYNJ2BPP57105 145 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 PPP3R1P63098 170 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 DEFA5Q01523 94 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 TMEM267Q0VDI3 215 aaPredicted RBP11.63□□□□□ -0.55
MCF2L-228ENST00000487354 RIPK1Q13546 671 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 HMGN3Q15651 99 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 MUL1Q969V5 352 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 MRPS24Q96EL2 167 aaKnown RBP11.63□□□□□ -0.55
MCF2L-228ENST00000487354 Q96M66 194 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 OR14A2Q96R54 314 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 S100A13Q99584 98 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 BANF2Q9H503 90 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 TUBA4BQ9H853 241 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 PLEKHA3Q9HB20 300 aa11.63□□□□□ -0.55
MCF2L-228ENST00000487354 RANGRFQ9HD47 186 aaPredicted RBP11.63□□□□□ -0.55
MCF2L-228ENST00000487354 ANKRD34BA5PLL1 514 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 RBMY1BA6NDE4 496 aaKnown RBP11.62□□□□□ -0.55
MCF2L-228ENST00000487354 RBMY1EA6NEQ0 496 aaKnown RBP11.62□□□□□ -0.55
MCF2L-228ENST00000487354 OR5H14A6NHG9 310 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 FAM90A7PA6NKC0 464 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 FAM90A23PA8MXZ1 464 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 H0Y980 276 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 RBMXL2O75526 392 aaKnown RBP11.62□□□□□ -0.55
MCF2L-228ENST00000487354 GPX5O75715 221 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 BRI3O95415 125 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 LALBAP00709 142 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 TFAP2AP05549 437 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 RBMY1DP0C7P1 496 aaKnown RBP11.62□□□□□ -0.55
MCF2L-228ENST00000487354 RPS11P62280 158 aaKnown RBP eCLIP11.62□□□□□ -0.55
MCF2L-228ENST00000487354 PSG5Q15238 335 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 ZIK1Q3SY52 487 aaPredicted RBP11.62□□□□□ -0.55
MCF2L-228ENST00000487354 RNLSQ5VYX0 342 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 RPL22L1Q6P5R6 122 aaKnown RBP11.62□□□□□ -0.55
MCF2L-228ENST00000487354 GLIPR1L1Q6UWM5 242 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 ZNF562Q6V9R5 426 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 OR5AN1Q8NGI8 311 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 CLCC1Q96S66 551 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 WFDC10AQ9H1F0 79 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 MRPS18AQ9NVS2 196 aaKnown RBP11.62□□□□□ -0.55
MCF2L-228ENST00000487354 SIGLEC8Q9NYZ4 499 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 RNF150Q9ULK6 438 aa11.62□□□□□ -0.55
MCF2L-228ENST00000487354 SHISA3A0PJX4 238 aa11.61□□□□□ -0.55
MCF2L-228ENST00000487354 EI24O14681 340 aa11.61□□□□□ -0.55
MCF2L-228ENST00000487354 PROP1O75360 226 aa11.61□□□□□ -0.55
MCF2L-228ENST00000487354 MGMTP16455 207 aa11.61□□□□□ -0.55
MCF2L-228ENST00000487354 GPR176Q14439 515 aa11.61□□□□□ -0.55
MCF2L-228ENST00000487354 PLGLAQ15195 96 aa11.61□□□□□ -0.55
MCF2L-228ENST00000487354 CCDC58Q4VC31 144 aa11.61□□□□□ -0.55
MCF2L-228ENST00000487354 GTSCR1Q86UQ5 136 aa11.61□□□□□ -0.55
MCF2L-228ENST00000487354 Q8N402 240 aa11.61□□□□□ -0.55
MCF2L-228ENST00000487354 POC5Q8NA72 575 aa11.61□□□□□ -0.55
MCF2L-228ENST00000487354 OR2AK2Q8NG84 335 aa11.61□□□□□ -0.55
MCF2L-228ENST00000487354 APH1BQ8WW43 257 aa11.61□□□□□ -0.55
MCF2L-228ENST00000487354 AGMATQ9BSE5 352 aa11.61□□□□□ -0.55
MCF2L-228ENST00000487354 METTL1Q9UBP6 276 aaKnown RBP11.61□□□□□ -0.55
MCF2L-228ENST00000487354 RYR1P21817 5038 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 SNTNA6NMZ2 147 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 OGG1O15527 345 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 IGKV1-16P04430 117 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 GLAP06280 429 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 FSTP19883 344 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 FUT3P21217 361 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 ETV1P50549 477 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 OR2G6Q5TZ20 316 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 LCN12Q6JVE5 192 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 RHOXF1Q8NHV9 184 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 SMIM19Q96E16 107 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 MYCBPQ99417 103 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-228ENST00000487354 SELENOIQ9C0D9 397 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 KCNIP1Q9NZI2 227 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 WASHC3Q9Y3C0 194 aa11.6□□□□□ -0.55
MCF2L-228ENST00000487354 VPS13DQ5THJ4 4388 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 TRBV5-7A0A0A0MS05 114 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 H3BUA1 57 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 PDCD6O75340 191 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 RBBP9O75884 186 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 BAG2O95816 211 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 CD7P09564 240 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 LINC00205P59089 165 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 DYRK1AQ13627 763 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 MOGAT2Q3SYC2 334 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 OR5T1Q8NG75 326 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 GRPEL2Q8TAA5 225 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 GALMQ96C23 342 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 ABHD14BQ96IU4 210 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 PGLYRP3Q96LB9 341 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 SULT4A1Q9BR01 284 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 PIPOXQ9P0Z9 390 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 SLC23A1Q9UHI7 598 aa11.59□□□□□ -0.55
MCF2L-228ENST00000487354 C13orf42A0A1B0GVH6 325 aa11.58□□□□□ -0.56
MCF2L-228ENST00000487354 ZNF785A8K8V0 405 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms