RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TMEM91Q6ZNR0 172 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 ZNF491Q8N8L2 437 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 NPBQ8NG41 125 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 OR6M1Q8NGM8 313 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 MYOZ3Q8TDC0 251 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 UFD1Q92890 307 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 CHCHD6Q9BRQ6 235 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 LPAR5Q9H1C0 372 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 AK3Q9UIJ7 227 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 SCOCQ9UIL1 159 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 NBEAL2Q6ZNJ1 2754 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 TRAV41A0A0B4J266 112 aa19.11■□□□□ 0.65
LIME1-206ENST00000487026 RAMP3O60896 148 aa19.11■□□□□ 0.65
LIME1-206ENST00000487026 HSMCR30P0CW71 290 aa19.11■□□□□ 0.65
LIME1-206ENST00000487026 CT45A6P0DMU7 189 aa19.11■□□□□ 0.65
LIME1-206ENST00000487026 CT45A5P0DMU8 189 aa19.11■□□□□ 0.65
LIME1-206ENST00000487026 CT45A7P0DMV0 189 aa19.11■□□□□ 0.65
LIME1-206ENST00000487026 AQP4P55087 323 aa19.11■□□□□ 0.65
LIME1-206ENST00000487026 FHL3Q13643 280 aa19.11■□□□□ 0.65
LIME1-206ENST00000487026 NRG4Q8WWG1 115 aa19.11■□□□□ 0.65
LIME1-206ENST00000487026 ABHD14BQ96IU4 210 aa19.11■□□□□ 0.65
LIME1-206ENST00000487026 KIAA1456Q9P272 454 aa19.11■□□□□ 0.65
LIME1-206ENST00000487026 SLC23A1Q9UHI7 598 aa19.11■□□□□ 0.65
LIME1-206ENST00000487026 AK6Q9Y3D8 172 aaKnown RBP19.11■□□□□ 0.65
LIME1-206ENST00000487026 IGLV1-40P01703 118 aa19.1■□□□□ 0.65
LIME1-206ENST00000487026 ECI1P42126 302 aa19.1■□□□□ 0.65
LIME1-206ENST00000487026 RPS25P62851 125 aaKnown RBP19.1■□□□□ 0.65
LIME1-206ENST00000487026 OR1N2Q8NGR9 330 aa19.1■□□□□ 0.65
LIME1-206ENST00000487026 UBE2E2Q96LR5 201 aa19.1■□□□□ 0.65
LIME1-206ENST00000487026 FBXL15Q9H469 300 aa19.1■□□□□ 0.65
LIME1-206ENST00000487026 PLGRKTQ9HBL7 147 aa19.1■□□□□ 0.65
LIME1-206ENST00000487026 PIPOXQ9P0Z9 390 aa19.1■□□□□ 0.65
LIME1-206ENST00000487026 OR1A1Q9P1Q5 309 aa19.1■□□□□ 0.65
LIME1-206ENST00000487026 I3L521 148 aa19.09■□□□□ 0.65
LIME1-206ENST00000487026 RAB29O14966 203 aa19.09■□□□□ 0.65
LIME1-206ENST00000487026 NDUFA3O95167 84 aa19.09■□□□□ 0.65
LIME1-206ENST00000487026 ARSBP15848 533 aa19.09■□□□□ 0.65
LIME1-206ENST00000487026 CEACAM6P40199 344 aa19.09■□□□□ 0.65
LIME1-206ENST00000487026 RAB9AP51151 201 aa19.09■□□□□ 0.65
LIME1-206ENST00000487026 GNB1P62873 340 aa19.09■□□□□ 0.65
LIME1-206ENST00000487026 NDPQ00604 133 aa19.09■□□□□ 0.65
LIME1-206ENST00000487026 ZNF260Q3ZCT1 412 aa19.09■□□□□ 0.65
LIME1-206ENST00000487026 VSIG4Q9Y279 399 aa19.09■□□□□ 0.65
LIME1-206ENST00000487026 TPRKBQ9Y3C4 175 aa19.09■□□□□ 0.65
LIME1-206ENST00000487026 FBXO7Q9Y3I1 522 aa19.09■□□□□ 0.65
LIME1-206ENST00000487026 KMT2CQ8NEZ4 4911 aaKnown RBP19.08■□□□□ 0.65
LIME1-206ENST00000487026 ERICH4A6NGS2 130 aa19.08■□□□□ 0.64
LIME1-206ENST00000487026 FCN1O00602 326 aa19.08■□□□□ 0.64
LIME1-206ENST00000487026 SNRPBP14678 240 aaKnown RBP19.08■□□□□ 0.64
LIME1-206ENST00000487026 TPBGQ13641 420 aa19.08■□□□□ 0.64
LIME1-206ENST00000487026 ECSCRQ19T08 205 aa19.08■□□□□ 0.64
LIME1-206ENST00000487026 ASPHD1Q5U4P2 390 aa19.08■□□□□ 0.64
LIME1-206ENST00000487026 MINDY2Q8NBR6 621 aa19.08■□□□□ 0.64
LIME1-206ENST00000487026 CASTOR1Q8WTX7 329 aa19.08■□□□□ 0.64
LIME1-206ENST00000487026 URM1Q9BTM9 101 aaKnown RBP19.08■□□□□ 0.64
LIME1-206ENST00000487026 C11orf54Q9H0W9 315 aaPredicted RBP19.08■□□□□ 0.64
LIME1-206ENST00000487026 DUSP21Q9H596 190 aa19.08■□□□□ 0.64
LIME1-206ENST00000487026 RNF150Q9ULK6 438 aa19.08■□□□□ 0.64
LIME1-206ENST00000487026 TENM3Q9P273 2699 aa19.07■□□□□ 0.64
LIME1-206ENST00000487026 SLC17A2O00624 439 aa19.07■□□□□ 0.64
LIME1-206ENST00000487026 TMEM50BP56557 158 aa19.07■□□□□ 0.64
LIME1-206ENST00000487026 CLDN12P56749 244 aa19.07■□□□□ 0.64
LIME1-206ENST00000487026 DCTN2Q13561 401 aaKnown RBP19.07■□□□□ 0.64
LIME1-206ENST00000487026 FAM71F2Q6NXP2 309 aa19.07■□□□□ 0.64
LIME1-206ENST00000487026 MOB1BQ7L9L4 216 aa19.07■□□□□ 0.64
LIME1-206ENST00000487026 FAM89BQ8N5H3 189 aa19.07■□□□□ 0.64
LIME1-206ENST00000487026 AGMATQ9BSE5 352 aa19.07■□□□□ 0.64
LIME1-206ENST00000487026 ALX4Q9H161 411 aaPredicted RBP19.07■□□□□ 0.64
LIME1-206ENST00000487026 RIMS4Q9H426 269 aaPredicted RBP19.07■□□□□ 0.64
LIME1-206ENST00000487026 LSM4Q9Y4Z0 139 aaKnown RBP19.07■□□□□ 0.64
LIME1-206ENST00000487026 A3GALT2U3KPV4 340 aa19.07■□□□□ 0.64
LIME1-206ENST00000487026 TRBV6-6A0A0A6YYG2 114 aa19.06■□□□□ 0.64
LIME1-206ENST00000487026 FOXI3A8MTJ6 420 aaPredicted RBP19.06■□□□□ 0.64
LIME1-206ENST00000487026 H0YJW9 148 aa19.06■□□□□ 0.64
LIME1-206ENST00000487026 H7C2Y5 167 aa19.06■□□□□ 0.64
LIME1-206ENST00000487026 RRHO14718 337 aa19.06■□□□□ 0.64
LIME1-206ENST00000487026 RGS10O43665 173 aa19.06■□□□□ 0.64
LIME1-206ENST00000487026 SCTP09683 121 aa19.06■□□□□ 0.64
LIME1-206ENST00000487026 VEGFCP49767 419 aa19.06■□□□□ 0.64
LIME1-206ENST00000487026 CX3CL1P78423 397 aa19.06■□□□□ 0.64
LIME1-206ENST00000487026 HLA-DRB3P79483 266 aa19.06■□□□□ 0.64
LIME1-206ENST00000487026 PLGLAQ15195 96 aa19.06■□□□□ 0.64
LIME1-206ENST00000487026 RAB11BQ15907 218 aa19.06■□□□□ 0.64
LIME1-206ENST00000487026 ARHGAP5-AS1Q96IT6 56 aa19.06■□□□□ 0.64
LIME1-206ENST00000487026 CCDC90BQ9GZT6 254 aa19.06■□□□□ 0.64
LIME1-206ENST00000487026 HSPA12AO43301 675 aa19.05■□□□□ 0.64
LIME1-206ENST00000487026 SOX15O60248 233 aa19.05■□□□□ 0.64
LIME1-206ENST00000487026 GSTP1P09211 210 aaKnown RBP19.05■□□□□ 0.64
LIME1-206ENST00000487026 ZBTB25P24278 435 aa19.05■□□□□ 0.64
LIME1-206ENST00000487026 MAP2K4P45985 399 aa19.05■□□□□ 0.64
LIME1-206ENST00000487026 LINC00205P59089 165 aa19.05■□□□□ 0.64
LIME1-206ENST00000487026 RUNX1Q01196 453 aa19.05■□□□□ 0.64
LIME1-206ENST00000487026 ZNF616Q08AN1 781 aa19.05■□□□□ 0.64
LIME1-206ENST00000487026 DRAXINQ8NBI3 349 aaPredicted RBP19.05■□□□□ 0.64
LIME1-206ENST00000487026 CLCC1Q96S66 551 aa19.05■□□□□ 0.64
LIME1-206ENST00000487026 PECRQ9BY49 303 aa19.05■□□□□ 0.64
LIME1-206ENST00000487026 Q9N2K0 584 aa19.05■□□□□ 0.64
LIME1-206ENST00000487026 HSF4Q9ULV5 492 aa19.05■□□□□ 0.64
LIME1-206ENST00000487026 A0A1W2PN81 502 aa19.04■□□□□ 0.64
LIME1-206ENST00000487026 OR5H14A6NHG9 310 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms