RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ACTBP60709 375 aa13.92□□□□□ -0.18
COL6A1-204ENST00000486023 UBE2UQ5VVX9 321 aa13.92□□□□□ -0.18
COL6A1-204ENST00000486023 LCNL1Q6ZST4 164 aa13.92□□□□□ -0.18
COL6A1-204ENST00000486023 ZNF833PQ6ZTB9 187 aa13.92□□□□□ -0.18
COL6A1-204ENST00000486023 OR8H1Q8NGG4 311 aa13.92□□□□□ -0.18
COL6A1-204ENST00000486023 IFI27L2Q9H2X8 130 aa13.92□□□□□ -0.18
COL6A1-204ENST00000486023 Q9N2K0 584 aa13.92□□□□□ -0.18
COL6A1-204ENST00000486023 PIPOXQ9P0Z9 390 aa13.92□□□□□ -0.18
COL6A1-204ENST00000486023 H7C2Y5 167 aa13.91□□□□□ -0.18
COL6A1-204ENST00000486023 RAB29O14966 203 aa13.91□□□□□ -0.18
COL6A1-204ENST00000486023 LDLRAD4O15165 306 aa13.91□□□□□ -0.18
COL6A1-204ENST00000486023 RPL23AP62750 156 aaKnown RBP13.91□□□□□ -0.18
COL6A1-204ENST00000486023 CD200R1LQ6Q8B3 271 aa13.91□□□□□ -0.18
COL6A1-204ENST00000486023 C8orf86Q6ZUL3 223 aa13.91□□□□□ -0.18
COL6A1-204ENST00000486023 KLHL30-AS1Q8NEE0 82 aa13.91□□□□□ -0.18
COL6A1-204ENST00000486023 MAFIPQ8WZ33 124 aa13.91□□□□□ -0.18
COL6A1-204ENST00000486023 C11orf54Q9H0W9 315 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-204ENST00000486023 ATG5Q9H1Y0 275 aa13.91□□□□□ -0.18
COL6A1-204ENST00000486023 ZNF107Q9UII5 783 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-204ENST00000486023 TRDCB7Z8K6 153 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 RRP9O43818 475 aaKnown RBP13.9□□□□□ -0.18
COL6A1-204ENST00000486023 VDAC1P21796 283 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 GADD45AP24522 165 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 PNLIPRP3Q17RR3 467 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 LY6G6FQ5SQ64 297 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 TEX38Q6PEX7 206 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 FAM131AQ6UXB0 335 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 FAM71E2Q8N5Q1 922 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 DRAXINQ8NBI3 349 aaPredicted RBP13.9□□□□□ -0.18
COL6A1-204ENST00000486023 OR10R2Q8NGX6 335 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 DUX3Q96PT4 197 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 GON7Q9BXV9 100 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 YTHDF1Q9BYJ9 559 aaKnown RBP13.9□□□□□ -0.18
COL6A1-204ENST00000486023 TXNL4BQ9NX01 149 aaKnown RBP13.9□□□□□ -0.18
COL6A1-204ENST00000486023 ZNF230Q9UIE0 474 aaPredicted RBP13.9□□□□□ -0.18
COL6A1-204ENST00000486023 MGAT4AQ9UM21 535 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 SSR3Q9UNL2 185 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 WSB1Q9Y6I7 421 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 NOTCH3Q9UM47 2321 aa13.9□□□□□ -0.18
COL6A1-204ENST00000486023 TRBV6-6A0A0A6YYG2 114 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 METTL21EPA6NDL7 271 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 BET1O15155 118 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 RPLP1P05386 114 aaKnown RBP13.89□□□□□ -0.19
COL6A1-204ENST00000486023 GSTP1P09211 210 aaKnown RBP13.89□□□□□ -0.19
COL6A1-204ENST00000486023 CT45A6P0DMU7 189 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 CT45A5P0DMU8 189 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 CT45A7P0DMV0 189 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 TALDO1P37837 337 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 RAB25P57735 213 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 ARFRP1Q13795 201 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 PLGLAQ15195 96 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 NEDD8Q15843 81 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 NR2C2APQ86WQ0 139 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 FCGR1BQ92637 280 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 PHF21AQ96BD5 680 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 OR51E2Q9H255 320 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 KIAA1456Q9P272 454 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 ZNF221Q9UK13 617 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 STUB1Q9UNE7 303 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 KCNK7Q9Y2U2 307 aa13.89□□□□□ -0.19
COL6A1-204ENST00000486023 NBR2O15453 112 aa13.88□□□□□ -0.19
COL6A1-204ENST00000486023 GSTT2P0CG29 244 aa13.88□□□□□ -0.19
COL6A1-204ENST00000486023 GSTT2BP0CG30 244 aa13.88□□□□□ -0.19
COL6A1-204ENST00000486023 MXD1Q05195 221 aa13.88□□□□□ -0.19
COL6A1-204ENST00000486023 CXorf66Q5JRM2 361 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-204ENST00000486023 ZNF773Q6PK81 442 aa13.88□□□□□ -0.19
COL6A1-204ENST00000486023 COMMD1Q8N668 190 aa13.88□□□□□ -0.19
COL6A1-204ENST00000486023 WFDC9Q8NEX5 89 aa13.88□□□□□ -0.19
COL6A1-204ENST00000486023 EDARADDQ8WWZ3 215 aa13.88□□□□□ -0.19
COL6A1-204ENST00000486023 CHCHD6Q9BRQ6 235 aa13.88□□□□□ -0.19
COL6A1-204ENST00000486023 PARP11Q9NR21 331 aa13.88□□□□□ -0.19
COL6A1-204ENST00000486023 ZFP57Q9NU63 452 aa13.88□□□□□ -0.19
COL6A1-204ENST00000486023 RDH8Q9NYR8 311 aa13.88□□□□□ -0.19
COL6A1-204ENST00000486023 DAPK2Q9UIK4 370 aa13.88□□□□□ -0.19
COL6A1-204ENST00000486023 RRP15Q9Y3B9 282 aaKnown RBP13.88□□□□□ -0.19
COL6A1-204ENST00000486023 IGKV1-6A0A0C4DH72 117 aa13.87□□□□□ -0.19
COL6A1-204ENST00000486023 LOC100506127A0A0U1RQW1 187 aa13.87□□□□□ -0.19
COL6A1-204ENST00000486023 FABP7O15540 132 aa13.87□□□□□ -0.19
COL6A1-204ENST00000486023 RAB6AP20340 208 aa13.87□□□□□ -0.19
COL6A1-204ENST00000486023 GALP22466 123 aa13.87□□□□□ -0.19
COL6A1-204ENST00000486023 LINC00205P59089 165 aa13.87□□□□□ -0.19
COL6A1-204ENST00000486023 IGSF11Q5DX21 431 aa13.87□□□□□ -0.19
COL6A1-204ENST00000486023 FOXB2Q5VYV0 432 aa13.87□□□□□ -0.19
COL6A1-204ENST00000486023 LIN54Q6MZP7 749 aa13.87□□□□□ -0.19
COL6A1-204ENST00000486023 ZNF695Q8IW36 515 aa13.87□□□□□ -0.19
COL6A1-204ENST00000486023 KCTD7Q96MP8 289 aa13.87□□□□□ -0.19
COL6A1-204ENST00000486023 CLCC1Q96S66 551 aa13.87□□□□□ -0.19
COL6A1-204ENST00000486023 NOTOA8MTQ0 251 aa13.86□□□□□ -0.19
COL6A1-204ENST00000486023 RAB27BO00194 218 aa13.86□□□□□ -0.19
COL6A1-204ENST00000486023 FCGR3AP08637 254 aa13.86□□□□□ -0.19
COL6A1-204ENST00000486023 HIST1H1DP16402 221 aaKnown RBP13.86□□□□□ -0.19
COL6A1-204ENST00000486023 C5orf64Q2M2E5 130 aa13.86□□□□□ -0.19
COL6A1-204ENST00000486023 KPRPQ5T749 579 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-204ENST00000486023 MRPL41Q8IXM3 137 aaKnown RBP13.86□□□□□ -0.19
COL6A1-204ENST00000486023 ABHD5Q8WTS1 349 aa13.86□□□□□ -0.19
COL6A1-204ENST00000486023 AGMATQ9BSE5 352 aa13.86□□□□□ -0.19
COL6A1-204ENST00000486023 FBXL15Q9H469 300 aa13.86□□□□□ -0.19
COL6A1-204ENST00000486023 RNF167Q9H6Y7 350 aa13.86□□□□□ -0.19
COL6A1-204ENST00000486023 NECAP2Q9NVZ3 263 aa13.86□□□□□ -0.19
COL6A1-204ENST00000486023 ELF5Q9UKW6 265 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms