RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 NPBQ8NG41 125 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 OR4X2Q8NGF9 303 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 OR52L2PQ8NGH6 319 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 R3HDM4Q96D70 268 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 S1PR3Q99500 378 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 ABHD14AQ9BUJ0 271 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 PECRQ9BY49 303 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 Q9N2K0 584 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 PIPOXQ9P0Z9 390 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 SORL1Q92673 2214 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 TMEM272A0A1B0GTI8 110 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 SHISA3A0PJX4 238 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 NCBP2LA6PVI3 153 aaKnown RBP5.52□□□□□ -1.53
VPS50-218ENST00000485994 TRDCB7Z8K6 153 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 RAB27BO00194 218 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 TMEM127O75204 238 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 NDUFA3O95167 84 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 ELANEP08246 267 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 RAB3BP20337 219 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 ZBTB25P24278 435 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 MC5RP33032 325 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 PPP1CCP36873 323 aaKnown RBP5.52□□□□□ -1.53
VPS50-218ENST00000485994 GPR12P47775 334 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 REG1BP48304 166 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 SERPINB10P48595 397 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 VEGFCP49767 419 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 F2RL1P55085 397 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 LSAMPQ13449 338 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 HNF4GQ14541 408 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 PNLIPRP3Q17RR3 467 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 NSUN5P1Q3KNT7 163 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 TMEM95Q3KNT9 176 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 PLAC9Q5JTB6 97 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 TEX38Q6PEX7 206 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 REC114Q7Z4M0 266 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 FOXRED2Q8IWF2 684 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 LYG1Q8N1E2 194 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 STPG2Q8N412 459 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 PRR18Q8N4B5 295 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 OR2AK2Q8NG84 335 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 OR10V1Q8NGI7 309 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 OR5AN1Q8NGI8 311 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 UBALD1Q8TB05 177 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 PHF21AQ96BD5 680 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 RASL11BQ9BPW5 248 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 NABP2Q9BQ15 211 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 ZNF251Q9BRH9 671 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS50-218ENST00000485994 SLC23A1Q9UHI7 598 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 AK3Q9UIJ7 227 aa5.52□□□□□ -1.53
VPS50-218ENST00000485994 IGHV3-72A0A0B4J1Y9 119 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 METTL21EPA6NDL7 271 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 LINC01548A6NM66 108 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 NOTOA8MTQ0 251 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 SERPINE3A8MV23 424 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 ZNF736B4DX44 427 aaPredicted RBP5.51□□□□□ -1.53
VPS50-218ENST00000485994 PROP1O75360 226 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 RBBP9O75884 186 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 CT45A6P0DMU7 189 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 CT45A5P0DMU8 189 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 CT45A7P0DMV0 189 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 OR5H8P0DN80 308 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 MYL9P24844 172 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 PPIFP30405 207 aaKnown RBP5.51□□□□□ -1.53
VPS50-218ENST00000485994 SOX6P35712 828 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 CEACAM6P40199 344 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 MYCNOSP40205 109 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 CDX1P47902 265 aaPredicted RBP5.51□□□□□ -1.53
VPS50-218ENST00000485994 CRIP2P52943 208 aaPredicted RBP5.51□□□□□ -1.53
VPS50-218ENST00000485994 SCAND1P57086 179 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 HLA-DRB3P79483 266 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 TAGLNQ01995 201 aaKnown RBP5.51□□□□□ -1.53
VPS50-218ENST00000485994 GNMTQ14749 295 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 C9orf152Q5JTZ5 239 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 ZNF773Q6PK81 442 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 C5orf24Q7Z6I8 188 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.51□□□□□ -1.53
VPS50-218ENST00000485994 OR4A4PQ8NGN8 299 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 OR10R2Q8NGX6 335 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 RCC1LQ96I51 464 aaKnown RBP5.51□□□□□ -1.53
VPS50-218ENST00000485994 ARHGAP5-AS1Q96IT6 56 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 CYYR1Q96J86 154 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 CMSS1Q9BQ75 279 aaKnown RBP5.51□□□□□ -1.53
VPS50-218ENST00000485994 C11orf54Q9H0W9 315 aaPredicted RBP5.51□□□□□ -1.53
VPS50-218ENST00000485994 CHMP1AQ9HD42 196 aaPredicted RBP5.51□□□□□ -1.53
VPS50-218ENST00000485994 C12orf4Q9NQ89 552 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 TXNL4BQ9NX01 149 aaKnown RBP5.51□□□□□ -1.53
VPS50-218ENST00000485994 KCNK7Q9Y2U2 307 aa5.51□□□□□ -1.53
VPS50-218ENST00000485994 SAA2-SAA4A0A096LPE2 208 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 TRBV6-7A0A0A0MS04 114 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 OR5H14A6NHG9 310 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 SH2D7A6NKC9 451 aaPredicted RBP5.5□□□□□ -1.53
VPS50-218ENST00000485994 TRIM64CA6NLI5 447 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 G3V4G9 280 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 MFNGO00587 321 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 SCGNO76038 276 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 IGHG4P01861 327 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 HLA-DRB1P01911 266 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 SCTP09683 121 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 SAA2P0DJI9 122 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms