RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 AUNIPQ9H7T9 357 aa14.2□□□□□ -0.14
SREBF1-213ENST00000485080 OR1A1Q9P1Q5 309 aa14.2□□□□□ -0.14
SREBF1-213ENST00000485080 ZNF230Q9UIE0 474 aaPredicted RBP14.2□□□□□ -0.14
SREBF1-213ENST00000485080 TRAV18A0A075B6X5 111 aa14.19□□□□□ -0.14
SREBF1-213ENST00000485080 SSX5O60225 188 aa14.19□□□□□ -0.14
SREBF1-213ENST00000485080 AMY1AP04745 511 aa14.19□□□□□ -0.14
SREBF1-213ENST00000485080 AMY2AP04746 511 aa14.19□□□□□ -0.14
SREBF1-213ENST00000485080 GSTT2P0CG29 244 aa14.19□□□□□ -0.14
SREBF1-213ENST00000485080 GSTT2BP0CG30 244 aa14.19□□□□□ -0.14
SREBF1-213ENST00000485080 REG1BP48304 166 aa14.19□□□□□ -0.14
SREBF1-213ENST00000485080 TMBIM6P55061 237 aa14.19□□□□□ -0.14
SREBF1-213ENST00000485080 GNG2P59768 71 aa14.19□□□□□ -0.14
SREBF1-213ENST00000485080 BLCAPP62952 87 aa14.19□□□□□ -0.14
SREBF1-213ENST00000485080 SAMD12Q8N8I0 201 aa14.19□□□□□ -0.14
SREBF1-213ENST00000485080 RAB2BQ8WUD1 216 aa14.19□□□□□ -0.14
SREBF1-213ENST00000485080 PARP12Q9H0J9 701 aaKnown RBP14.19□□□□□ -0.14
SREBF1-213ENST00000485080 PKD1L1Q8TDX9 2849 aa14.19□□□□□ -0.14
SREBF1-213ENST00000485080 SAA2-SAA4A0A096LPE2 208 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 FGF16O43320 207 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 IGKV1D-33P01593 117 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 IGKV1-33P01594 117 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 APOA1P02647 267 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 CTXN2P0C2S0 81 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 SAA2P0DJI9 122 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-213ENST00000485080 IGSF11Q5DX21 431 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 OR2T10Q8NGZ9 312 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 OR10J5Q8NHC4 309 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 NUDCD2Q8WVJ2 157 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 AP3S1Q92572 193 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 EAF1Q96JC9 268 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-213ENST00000485080 S1PR3Q99500 378 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 CITED1Q99966 193 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 RDH8Q9NYR8 311 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 GAB2Q9UQC2 676 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 MOB4Q9Y3A3 225 aa14.18□□□□□ -0.14
SREBF1-213ENST00000485080 WNK1Q9H4A3 2382 aa14.17□□□□□ -0.14
SREBF1-213ENST00000485080 IGKV1D-8A0A087WSZ0 117 aa14.17□□□□□ -0.14
SREBF1-213ENST00000485080 ST8SIA5O15466 376 aa14.17□□□□□ -0.14
SREBF1-213ENST00000485080 ZNF182P17025 639 aaPredicted RBP14.17□□□□□ -0.14
SREBF1-213ENST00000485080 TMEM11P17152 192 aa14.17□□□□□ -0.14
SREBF1-213ENST00000485080 OR3A3P47888 321 aa14.17□□□□□ -0.14
SREBF1-213ENST00000485080 LSAMPQ13449 338 aa14.17□□□□□ -0.14
SREBF1-213ENST00000485080 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.17□□□□□ -0.14
SREBF1-213ENST00000485080 OR8H1Q8NGG4 311 aa14.17□□□□□ -0.14
SREBF1-213ENST00000485080 NABP2Q9BQ15 211 aa14.17□□□□□ -0.14
SREBF1-213ENST00000485080 SERTAD4Q9NUC0 356 aa14.17□□□□□ -0.14
SREBF1-213ENST00000485080 CMYA5Q8N3K9 4069 aa14.16□□□□□ -0.14
SREBF1-213ENST00000485080 MOSP00540 346 aa14.16□□□□□ -0.14
SREBF1-213ENST00000485080 HES1Q14469 280 aa14.16□□□□□ -0.14
SREBF1-213ENST00000485080 CNIH2Q6PI25 160 aa14.16□□□□□ -0.14
SREBF1-213ENST00000485080 CLVS1Q8IUQ0 354 aaPredicted RBP14.16□□□□□ -0.14
SREBF1-213ENST00000485080 WIPF2Q8TF74 440 aaPredicted RBP14.16□□□□□ -0.14
SREBF1-213ENST00000485080 MAFIPQ8WZ33 124 aa14.16□□□□□ -0.14
SREBF1-213ENST00000485080 ST6GALNAC5Q9BVH7 336 aa14.16□□□□□ -0.14
SREBF1-213ENST00000485080 MRPL20Q9BYC9 149 aaKnown RBP14.16□□□□□ -0.14
SREBF1-213ENST00000485080 WNT10AQ9GZT5 417 aa14.16□□□□□ -0.14
SREBF1-213ENST00000485080 SCOCQ9UIL1 159 aa14.16□□□□□ -0.14
SREBF1-213ENST00000485080 SIGLEC9Q9Y336 463 aa14.16□□□□□ -0.14
SREBF1-213ENST00000485080 VWFP04275 2813 aa14.16□□□□□ -0.14
SREBF1-213ENST00000485080 IGHV3-72A0A0B4J1Y9 119 aa14.15□□□□□ -0.14
SREBF1-213ENST00000485080 ZNF736B4DX44 427 aaPredicted RBP14.15□□□□□ -0.14
SREBF1-213ENST00000485080 BET1O15155 118 aa14.15□□□□□ -0.14
SREBF1-213ENST00000485080 CBX5P45973 191 aa14.15□□□□□ -0.14
SREBF1-213ENST00000485080 KRTAP10-3P60369 221 aa14.15□□□□□ -0.14
SREBF1-213ENST00000485080 TMEM69Q5SWH9 247 aa14.15□□□□□ -0.14
SREBF1-213ENST00000485080 MZT2AQ6P582 158 aa14.15□□□□□ -0.14
SREBF1-213ENST00000485080 Q6ZS46 218 aa14.15□□□□□ -0.14
SREBF1-213ENST00000485080 HOGA1Q86XE5 327 aa14.15□□□□□ -0.14
SREBF1-213ENST00000485080 H1FOOQ8IZA3 346 aaPredicted RBP14.15□□□□□ -0.14
SREBF1-213ENST00000485080 C5orf56Q8N8D9 126 aa14.15□□□□□ -0.14
SREBF1-213ENST00000485080 ABHD14BQ96IU4 210 aa14.15□□□□□ -0.14
SREBF1-213ENST00000485080 PLSCR3Q9NRY6 295 aa14.15□□□□□ -0.14
SREBF1-213ENST00000485080 COMMD3Q9UBI1 195 aa14.15□□□□□ -0.14
SREBF1-213ENST00000485080 ANXA10Q9UJ72 324 aa14.15□□□□□ -0.14
SREBF1-213ENST00000485080 PROP1O75360 226 aa14.14□□□□□ -0.15
SREBF1-213ENST00000485080 TPPPO94811 219 aa14.14□□□□□ -0.15
SREBF1-213ENST00000485080 CT45A6P0DMU7 189 aa14.14□□□□□ -0.15
SREBF1-213ENST00000485080 CT45A5P0DMU8 189 aa14.14□□□□□ -0.15
SREBF1-213ENST00000485080 CT45A7P0DMV0 189 aa14.14□□□□□ -0.15
SREBF1-213ENST00000485080 TAS2R20P59543 309 aa14.14□□□□□ -0.15
SREBF1-213ENST00000485080 ABCA11PQ4W5N1 156 aa14.14□□□□□ -0.15
SREBF1-213ENST00000485080 OR5AN1Q8NGI8 311 aa14.14□□□□□ -0.15
SREBF1-213ENST00000485080 SGMS2Q8NHU3 365 aa14.14□□□□□ -0.15
SREBF1-213ENST00000485080 GINS4Q9BRT9 223 aa14.14□□□□□ -0.15
SREBF1-213ENST00000485080 ZNF221Q9UK13 617 aa14.14□□□□□ -0.15
SREBF1-213ENST00000485080 ANAPC10Q9UM13 185 aa14.14□□□□□ -0.15
SREBF1-213ENST00000485080 NBEAL1Q6ZS30 2694 aa14.13□□□□□ -0.15
SREBF1-213ENST00000485080 FBN3Q75N90 2809 aa14.13□□□□□ -0.15
SREBF1-213ENST00000485080 OR5H14A6NHG9 310 aa14.13□□□□□ -0.15
SREBF1-213ENST00000485080 HLA-DQB1P01920 261 aa14.13□□□□□ -0.15
SREBF1-213ENST00000485080 EIF4EP06730 217 aaKnown RBP14.13□□□□□ -0.15
SREBF1-213ENST00000485080 MC5RP33032 325 aa14.13□□□□□ -0.15
SREBF1-213ENST00000485080 HNF4GQ14541 408 aa14.13□□□□□ -0.15
SREBF1-213ENST00000485080 SPCS2Q15005 226 aa14.13□□□□□ -0.15
SREBF1-213ENST00000485080 RPL39P5Q59GN2 51 aa14.13□□□□□ -0.15
SREBF1-213ENST00000485080 SMIM31A0A1B0GVY4 71 aa14.12□□□□□ -0.15
SREBF1-213ENST00000485080 TUSC2O75896 110 aa14.12□□□□□ -0.15
SREBF1-213ENST00000485080 OR8U9P0C7N5 309 aa14.12□□□□□ -0.15
SREBF1-213ENST00000485080 SOX6P35712 828 aa14.12□□□□□ -0.15
SREBF1-213ENST00000485080 VDAC2P45880 294 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms