RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ZNF256Q9Y2P7 627 aaPredicted RBP8.9□□□□□ -0.98
SCFD1-206ENST00000484733 LSM2Q9Y333 95 aaKnown RBP8.9□□□□□ -0.98
SCFD1-206ENST00000484733 RAB29O14966 203 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 RBBP9O75884 186 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 BPNT1O95861 308 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 HTR2CP28335 458 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 MC5RP33032 325 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 GABPB1Q06547 395 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-206ENST00000484733 RCN1Q15293 331 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 C6orf201Q7Z4U5 140 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 PARP11Q9NR21 331 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 MGAT4AQ9UM21 535 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 NUBP2Q9Y5Y2 271 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 OR5H14A6NHG9 310 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 UCHL1P09936 223 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 CT45A6P0DMU7 189 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 CT45A5P0DMU8 189 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 CT45A7P0DMV0 189 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 SRMP19623 302 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 GNB1P62873 340 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 UNC119Q13432 240 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 RBM48Q5RL73 367 aaKnown RBP8.89□□□□□ -0.99
SCFD1-206ENST00000484733 OR10K2Q6IF99 312 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 ZNF429Q86V71 674 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 FAM89BQ8N5H3 189 aa8.89□□□□□ -0.99
SCFD1-206ENST00000484733 RRHO14718 337 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 INSL4Q14641 139 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 HSD17B12Q53GQ0 312 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 FAM27D1Q5T7N8 215 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 CD200R1LQ6Q8B3 271 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 OR5AN1Q8NGI8 311 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 OR6M1Q8NGM8 313 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 FOXA2Q9Y261 457 aaPredicted RBP8.88□□□□□ -0.99
SCFD1-206ENST00000484733 KMT2CQ8NEZ4 4911 aaKnown RBP8.88□□□□□ -0.99
SCFD1-206ENST00000484733 H0YJW9 148 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 ARPC1BO15143 372 aaKnown RBP8.88□□□□□ -0.99
SCFD1-206ENST00000484733 ST8SIA5O15466 376 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 EGR2P11161 476 aaPredicted RBP8.88□□□□□ -0.99
SCFD1-206ENST00000484733 CX3CL1P78423 397 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 TMEM267Q0VDI3 215 aaPredicted RBP8.88□□□□□ -0.99
SCFD1-206ENST00000484733 IRF3Q14653 427 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 SPHARQ15513 63 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 FAM131AQ6UXB0 335 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 CEACAM19Q7Z692 300 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 DCUN1D4Q92564 292 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 PTX4Q96A99 478 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 AGMATQ9BSE5 352 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 NICN1Q9BSH3 213 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 LPAR5Q9H1C0 372 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 TPSG1Q9NRR2 321 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 HSF4Q9ULV5 492 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 WASHC3Q9Y3C0 194 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 FBXO7Q9Y3I1 522 aa8.88□□□□□ -0.99
SCFD1-206ENST00000484733 A0A0A6YYD4 124 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 FOXI3A8MTJ6 420 aaPredicted RBP8.87□□□□□ -0.99
SCFD1-206ENST00000484733 OVOL1O14753 267 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 NDPQ00604 133 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 PYHIN1Q6K0P9 492 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 IL1F10Q8WWZ1 152 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 URM1Q9BTM9 101 aaKnown RBP8.87□□□□□ -0.99
SCFD1-206ENST00000484733 TMED9Q9BVK6 235 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 TOLLIPQ9H0E2 274 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 CHMP1AQ9HD42 196 aaPredicted RBP8.87□□□□□ -0.99
SCFD1-206ENST00000484733 PLEKHJ1Q9NW61 149 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 LINC01619G3V211 115 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 LGALS1P09382 135 aaKnown RBP8.87□□□□□ -0.99
SCFD1-206ENST00000484733 RANBP1P43487 201 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 AKIRIN2Q53H80 203 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 RPL39P5Q59GN2 51 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 EDARADDQ8WWZ3 215 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 VCXQ9H320 206 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 FBXL15Q9H469 300 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 ISYNA1Q9NPH2 558 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 RNF150Q9ULK6 438 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 SMAD5-AS1Q9Y6J3 95 aa8.87□□□□□ -0.99
SCFD1-206ENST00000484733 SOX15O60248 233 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 HLA-DRB3P79483 266 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 TRAM1Q15629 374 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 ZNF562Q6V9R5 426 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 C11orf54Q9H0W9 315 aaPredicted RBP8.86□□□□□ -0.99
SCFD1-206ENST00000484733 Q9N2K0 584 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 SCN3BQ9NY72 215 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 AK3Q9UIJ7 227 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 A0A1W2PN81 502 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 C3orf84H3BNL1 204 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 FCN1O00602 326 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 SLC17A2O00624 439 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 SOCS1O15524 211 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 SPDEFO95238 335 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 ZBTB25P24278 435 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 CHRNA7P36544 502 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 CEACAM6P40199 344 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 TPBGQ13641 420 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 PSG5Q15238 335 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 ECSCRQ19T08 205 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 ACSM6Q6P461 480 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 PPP1R27Q86WC6 154 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 SETD6Q8TBK2 473 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 UFD1Q92890 307 aa8.86□□□□□ -0.99
SCFD1-206ENST00000484733 DLX4Q92988 240 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms