RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 RAB2BQ8WUD1 216 aa12.69□□□□□ -0.38
UPF3A-208ENST00000484246 CAPSLQ8WWF8 208 aa12.69□□□□□ -0.38
UPF3A-208ENST00000484246 ZNF251Q9BRH9 671 aa12.69□□□□□ -0.38
UPF3A-208ENST00000484246 PRSS22Q9GZN4 317 aa12.69□□□□□ -0.38
UPF3A-208ENST00000484246 PARP12Q9H0J9 701 aaKnown RBP12.69□□□□□ -0.38
UPF3A-208ENST00000484246 ELF5Q9UKW6 265 aaPredicted RBP12.69□□□□□ -0.38
UPF3A-208ENST00000484246 MOB4Q9Y3A3 225 aa12.69□□□□□ -0.38
UPF3A-208ENST00000484246 RAB29O14966 203 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 HSPA12AO43301 675 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 FGF16O43320 207 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 APOA1P02647 267 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 AMY1AP04745 511 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 AMY2AP04746 511 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 GSTT2P0CG29 244 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 GSTT2BP0CG30 244 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 RORCP51449 518 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 TMBIM6P55061 237 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 LSAMPQ13449 338 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 SAMD12Q8N8I0 201 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 NUDCD2Q8WVJ2 157 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 C11orf54Q9H0W9 315 aaPredicted RBP12.68□□□□□ -0.38
UPF3A-208ENST00000484246 AUNIPQ9H7T9 357 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 RDH8Q9NYR8 311 aa12.68□□□□□ -0.38
UPF3A-208ENST00000484246 ZNF230Q9UIE0 474 aaPredicted RBP12.68□□□□□ -0.38
UPF3A-208ENST00000484246 TRAV18A0A075B6X5 111 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 IGKV1D-8A0A087WSZ0 117 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 ST8SIA5O15466 376 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 IGKV1D-33P01593 117 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 IGKV1-33P01594 117 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 CTXN2P0C2S0 81 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 CEACAM6P40199 344 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 IGSF11Q5DX21 431 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 MOB3BQ86TA1 216 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.67□□□□□ -0.38
UPF3A-208ENST00000484246 OR8H1Q8NGG4 311 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 OR2T10Q8NGZ9 312 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 AP3S1Q92572 193 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 S100A16Q96FQ6 103 aaKnown RBP12.67□□□□□ -0.38
UPF3A-208ENST00000484246 EAF1Q96JC9 268 aaPredicted RBP12.67□□□□□ -0.38
UPF3A-208ENST00000484246 CITED1Q99966 193 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 NABP2Q9BQ15 211 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 MRPL20Q9BYC9 149 aaKnown RBP12.67□□□□□ -0.38
UPF3A-208ENST00000484246 SERTAD4Q9NUC0 356 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 GAB2Q9UQC2 676 aa12.67□□□□□ -0.38
UPF3A-208ENST00000484246 ZNF182P17025 639 aaPredicted RBP12.66□□□□□ -0.38
UPF3A-208ENST00000484246 TMEM11P17152 192 aa12.66□□□□□ -0.38
UPF3A-208ENST00000484246 BLCAPP62952 87 aa12.66□□□□□ -0.38
UPF3A-208ENST00000484246 CLVS1Q8IUQ0 354 aaPredicted RBP12.66□□□□□ -0.38
UPF3A-208ENST00000484246 H1FOOQ8IZA3 346 aaPredicted RBP12.66□□□□□ -0.38
UPF3A-208ENST00000484246 OR10J5Q8NHC4 309 aa12.66□□□□□ -0.38
UPF3A-208ENST00000484246 WIPF2Q8TF74 440 aaPredicted RBP12.66□□□□□ -0.38
UPF3A-208ENST00000484246 MAFIPQ8WZ33 124 aa12.66□□□□□ -0.38
UPF3A-208ENST00000484246 S1PR3Q99500 378 aa12.66□□□□□ -0.38
UPF3A-208ENST00000484246 WNT10AQ9GZT5 417 aa12.66□□□□□ -0.38
UPF3A-208ENST00000484246 SCOCQ9UIL1 159 aa12.66□□□□□ -0.38
UPF3A-208ENST00000484246 ANAPC10Q9UM13 185 aa12.66□□□□□ -0.38
UPF3A-208ENST00000484246 TENM1Q9UKZ4 2725 aa12.66□□□□□ -0.38
UPF3A-208ENST00000484246 IGHV3-72A0A0B4J1Y9 119 aa12.65□□□□□ -0.38
UPF3A-208ENST00000484246 MOSP00540 346 aa12.65□□□□□ -0.38
UPF3A-208ENST00000484246 CBX5P45973 191 aa12.65□□□□□ -0.38
UPF3A-208ENST00000484246 OR3A3P47888 321 aa12.65□□□□□ -0.38
UPF3A-208ENST00000484246 HES1Q14469 280 aa12.65□□□□□ -0.38
UPF3A-208ENST00000484246 TMEM69Q5SWH9 247 aa12.65□□□□□ -0.38
UPF3A-208ENST00000484246 CNIH2Q6PI25 160 aa12.65□□□□□ -0.38
UPF3A-208ENST00000484246 HOGA1Q86XE5 327 aa12.65□□□□□ -0.38
UPF3A-208ENST00000484246 C5orf56Q8N8D9 126 aa12.65□□□□□ -0.38
UPF3A-208ENST00000484246 ANXA10Q9UJ72 324 aa12.65□□□□□ -0.38
UPF3A-208ENST00000484246 OR5H14A6NHG9 310 aa12.64□□□□□ -0.39
UPF3A-208ENST00000484246 ZNF736B4DX44 427 aaPredicted RBP12.64□□□□□ -0.39
UPF3A-208ENST00000484246 BET1O15155 118 aa12.64□□□□□ -0.39
UPF3A-208ENST00000484246 EIF4EP06730 217 aaKnown RBP12.64□□□□□ -0.39
UPF3A-208ENST00000484246 TAS2R20P59543 309 aa12.64□□□□□ -0.39
UPF3A-208ENST00000484246 KRTAP10-3P60369 221 aa12.64□□□□□ -0.39
UPF3A-208ENST00000484246 MZT2AQ6P582 158 aa12.64□□□□□ -0.39
UPF3A-208ENST00000484246 Q6ZS46 218 aa12.64□□□□□ -0.39
UPF3A-208ENST00000484246 OR5AN1Q8NGI8 311 aa12.64□□□□□ -0.39
UPF3A-208ENST00000484246 ABHD14BQ96IU4 210 aa12.64□□□□□ -0.39
UPF3A-208ENST00000484246 ST6GALNAC5Q9BVH7 336 aa12.64□□□□□ -0.39
UPF3A-208ENST00000484246 PLSCR3Q9NRY6 295 aa12.64□□□□□ -0.39
UPF3A-208ENST00000484246 CCDC59Q9P031 241 aaKnown RBP12.64□□□□□ -0.39
UPF3A-208ENST00000484246 COMMD3Q9UBI1 195 aa12.64□□□□□ -0.39
UPF3A-208ENST00000484246 SIGLEC9Q9Y336 463 aa12.64□□□□□ -0.39
UPF3A-208ENST00000484246 PROP1O75360 226 aa12.63□□□□□ -0.39
UPF3A-208ENST00000484246 TPPPO94811 219 aa12.63□□□□□ -0.39
UPF3A-208ENST00000484246 CT45A6P0DMU7 189 aa12.63□□□□□ -0.39
UPF3A-208ENST00000484246 CT45A5P0DMU8 189 aa12.63□□□□□ -0.39
UPF3A-208ENST00000484246 CT45A7P0DMV0 189 aa12.63□□□□□ -0.39
UPF3A-208ENST00000484246 SPCS2Q15005 226 aa12.63□□□□□ -0.39
UPF3A-208ENST00000484246 RPL39P5Q59GN2 51 aa12.63□□□□□ -0.39
UPF3A-208ENST00000484246 KLHDC1Q8N7A1 406 aa12.63□□□□□ -0.39
UPF3A-208ENST00000484246 SGMS2Q8NHU3 365 aa12.63□□□□□ -0.39
UPF3A-208ENST00000484246 GINS4Q9BRT9 223 aa12.63□□□□□ -0.39
UPF3A-208ENST00000484246 LIN7CQ9NUP9 197 aaKnown RBP12.63□□□□□ -0.39
UPF3A-208ENST00000484246 ZNF221Q9UK13 617 aa12.63□□□□□ -0.39
UPF3A-208ENST00000484246 H0YJW9 148 aa12.62□□□□□ -0.39
UPF3A-208ENST00000484246 TUSC2O75896 110 aa12.62□□□□□ -0.39
UPF3A-208ENST00000484246 VDAC2P45880 294 aaPredicted RBP12.62□□□□□ -0.39
UPF3A-208ENST00000484246 GPR12P47775 334 aa12.62□□□□□ -0.39
UPF3A-208ENST00000484246 ABCA11PQ4W5N1 156 aa12.62□□□□□ -0.39
UPF3A-208ENST00000484246 FAM71E2Q8N5Q1 922 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms