RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, human

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-215	ENST00000484203	BEAN1	Q3B7T3	259 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	KHDC1L	Q5JSQ8	128 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	C9orf152	Q5JTZ5	239 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	RBM48	Q5RL73	367 aa	Known RBP	4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	BAIAP2L2	Q6UXY1	529 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	PRSS48	Q7RTY5	328 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	OR2W3	Q7Z3T1	314 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	LYPD6	Q86Y78	171 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	TMEM104	Q8NE00	496 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	OR2AK2	Q8NG84	335 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	CCDC107	Q8WV48	283 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	SGCD	Q92629	289 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	ST6GALNAC6	Q969X2	333 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	YPEL2	Q96QA6	119 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	S1PR3	Q99500	378 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	ABHD14A	Q9BUJ0	271 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	TMED9	Q9BVK6	235 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	TM2D1	Q9BX74	207 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	ANKRD60	Q9BZ19	345 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	ABCG5	Q9H222	651 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203		Q9H521	79 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	DUSP21	Q9H596	190 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	PLGRKT	Q9HBL7	147 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	TAF9B	Q9HBM6	251 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	TMEM140	Q9NV12	185 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	PLEKHJ1	Q9NW61	149 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	PIPOX	Q9P0Z9	390 aa		4.88	□□□□□ -1.63
PTCD3-215	ENST00000484203	TRBV6-6	A0A0A6YYG2	114 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	MAGEA13P	A6NCF6	341 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	SLC17A2	O00624	439 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	ITGB1BP1	O14713	200 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	PDCD5	O14737	125 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	RAB29	O14966	203 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	PIN1P1	O15428	100 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	RBBP9	O75884	186 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	DIRAS3	O95661	229 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	IGHV3-7	P01780	117 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	ELANE	P08246	267 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	HSMCR30	P0CW71	290 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	CD37	P11049	281 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	VDAC1	P21796	283 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	GAL	P22466	123 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	CHAT	P28329	748 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	MC5R	P33032	325 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	SOX6	P35712	828 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	MYCNOS	P40205	109 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	GPR12	P47775	334 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	SERPINB10	P48595	397 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	RAP2B	P61225	183 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	DGCR2	P98153	550 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	HNF4G	Q14541	408 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	IRF3	Q14653	427 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	RAB11B	Q15907	218 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	MORN2	Q502X0	79 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	LAIR2	Q6ISS4	152 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	STPG2	Q8N412	459 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	PRR18	Q8N4B5	295 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203		Q8N6K4	173 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	OR56B1	Q8NGI3	324 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	OR4K15	Q8NH41	348 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	LEAP2	Q969E1	77 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	FAM46B	Q96A09	425 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	PHF21A	Q96BD5	680 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	ZNF503	Q96F45	646 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	RNF5	Q99942	180 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	ZNF251	Q9BRH9	671 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	TMPRSS5	Q9H3S3	457 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	BANF2	Q9H503	90 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	C12orf4	Q9NQ89	552 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	KIAA1456	Q9P272	454 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	HSF4	Q9ULV5	492 aa		4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	LSM2	Q9Y333	95 aa	Known RBP	4.87	□□□□□ -1.63
PTCD3-215	ENST00000484203	TRAV39	A0A0B4J263	110 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203		A0A1W2PP11	408 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	OR5H14	A6NHG9	310 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	TMEM14DP	A8MWL7	114 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203		G3V4G9	280 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	SCAF4	O95104	1147 aa	Known RBP	4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	NAPSA	O96009	420 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	IGF1	P05019	195 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	RCC1	P18754	421 aa	Predicted RBP	4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	ZBTB25	P24278	435 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	CRHBP	P24387	322 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	CD40LG	P29965	261 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	BLVRB	P30043	206 aa	Predicted RBP	4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	CDX1	P47902	265 aa	Predicted RBP	4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	REG1B	P48304	166 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	AQP4	P55087	323 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	RPL23A	P62750	156 aa	Known RBP	4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	P2RY14	Q15391	338 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	MMD	Q15546	238 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	HMGN3	Q15651	99 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	TBCE	Q15813	527 aa	Predicted RBP	4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	TMEM95	Q3KNT9	176 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	CT45A1	Q5HYN5	189 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	LIPK	Q5VXJ0	399 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	SIGIRR	Q6IA17	410 aa		4.86	□□□□□ -1.63
PTCD3-215	ENST00000484203	TMEM65	Q6PI78	240 aa		4.86	□□□□□ -1.63

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