RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 EPHA1P21709 976 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 PSMB6P28072 239 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 S100A11P31949 105 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 GATA4P43694 442 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 GPR6P46095 362 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-216ENST00000484087 GABRA2P47869 451 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 DSCR9P59020 149 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 RAB14P61106 215 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 RND3P61587 244 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 COL10A1Q03692 680 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 SMCO1Q147U7 214 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 OPCMLQ14982 345 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 LRRC37A5PQ49AS3 106 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 Q5BKY6 102 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 TMEM65Q6PI78 240 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 MOGAT3Q86VF5 341 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 GAPTQ8N292 157 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 BOLLQ8N9W6 283 aaKnown RBP5.76□□□□□ -1.49
BRCA1-216ENST00000484087 PPP1R1CQ8WVI7 109 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 ITLN1Q8WWA0 313 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 CCL17Q92583 94 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 WDR89Q96FK6 387 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-216ENST00000484087 C2orf50Q96LR7 162 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 CABLES2Q9BTV7 478 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 EGLN1Q9GZT9 426 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 ARL6Q9H0F7 186 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 MS4A5Q9H3V2 200 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 SAP30LQ9HAJ7 183 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 SEBOXQ9HB31 216 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-216ENST00000484087 RAB9BQ9NP90 201 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 MBNL3Q9NUK0 354 aaKnown RBP5.76□□□□□ -1.49
BRCA1-216ENST00000484087 RNF7Q9UBF6 113 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 OR2W1Q9Y3N9 320 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 IGHV1-69-2A0A0G2JMI3 117 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 C3orf85A0A1B0GTC6 90 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 KANTRA0A1W2PQU2 76 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 ADARB2-AS1A8MUL3 147 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 MPPED1O15442 326 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 CRLF1O75462 422 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 TUSC2O75896 110 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 OR2F2O95006 317 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 TGFAP01135 160 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 OR5AC1P0C628 307 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 PRDX2P32119 198 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 LUMP51884 338 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-216ENST00000484087 OR2F1Q13607 317 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 ZNF345Q14585 488 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 HMGN3Q15651 99 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 IAH1Q2TAA2 248 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-216ENST00000484087 ANKRD55Q3KP44 614 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 ESCO2Q56NI9 601 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 KRBOX4Q5JUW0 171 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 FAM201AQ5SY85 155 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 TEX261Q6UWH6 196 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 Q6ZPA2 131 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 C1orf229Q6ZS94 237 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-216ENST00000484087 TMUB2Q71RG4 321 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 C1orf87Q8N0U7 546 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 PRR18Q8N4B5 295 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 LRTM2Q8N967 370 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 OR10V1Q8NGI7 309 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 OR5D13Q8NGL4 314 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 PLPPR1Q8TBJ4 325 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 GALMQ96C23 342 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 AKR1E2Q96JD6 320 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 SNX22Q96L94 193 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 SPIN2AQ99865 258 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 SPIN2BQ9BPZ2 258 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 TAF9BQ9HBM6 251 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 RDH8Q9NYR8 311 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 GSKIPQ9P0R6 139 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 UBQLN2Q9UHD9 624 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 UBE2J1Q9Y385 318 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-216ENST00000484087 TMED3Q9Y3Q3 217 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 MAB21L2Q9Y586 359 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 U3KQ87 197 aa5.75□□□□□ -1.49
BRCA1-216ENST00000484087 TRAV14DV4A0A0A6YYC5 116 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 DUXBA0A1W2PPF3 345 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 RNF212BA8MTL3 300 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 NDUFS8O00217 210 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 HSD17B6O14756 317 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 MGST3O14880 152 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 SPINT2O43291 252 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 PSPNO60542 156 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 ADAP1O75689 374 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 MPC2O95563 127 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 CYB5R3P00387 301 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-216ENST00000484087 CD55P08174 381 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 ADH4P08319 380 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 PSG2P11465 335 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 CXCL2P19875 107 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 GNRHRP30968 328 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 CEACAM6P40199 344 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 CEBPDP49716 269 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-216ENST00000484087 AP2S1P53680 142 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-216ENST00000484087 AESQ08117 197 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 TMEM187Q14656 261 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 HERPUD1Q15011 391 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 FAM209AQ5JX71 171 aa5.74□□□□□ -1.49
BRCA1-216ENST00000484087 CYB5R2Q6BCY4 276 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms