RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 AGAP20933 346 aa13.14□□□□□ -0.31
RXRA-202ENST00000481739 ZNF66Q6ZN08 573 aa13.14□□□□□ -0.31
RXRA-202ENST00000481739 OR2D2Q9H210 308 aa13.14□□□□□ -0.31
RXRA-202ENST00000481739 COA4Q9NYJ1 87 aa13.14□□□□□ -0.31
RXRA-202ENST00000481739 LPAR3Q9UBY5 353 aa13.14□□□□□ -0.31
RXRA-202ENST00000481739 ANKHD1Q8IWZ3 2542 aaKnown RBP13.14□□□□□ -0.31
RXRA-202ENST00000481739 C15orf65H3BRN8 121 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 ZNF266Q14584 549 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 TMEM30BQ3MIR4 351 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 FAM209AQ5JX71 171 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 C14orf79Q96F83 325 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 RAB40CQ96S21 281 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 GPHA2Q96T91 129 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 TAS2R3Q9NYW6 316 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 NUP50Q9UKX7 468 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 ICE1Q9Y2F5 2266 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 LRRC30A6NM36 301 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 TEX46H3BTG2 121 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 SEC11BP0C7V7 166 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 FAM157CP0CG43 387 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 SSTR5P35346 364 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 SULT1A2P50226 295 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 AKR1C2P52895 323 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 POLR2GP62487 172 aaKnown RBP eCLIP13.13□□□□□ -0.31
RXRA-202ENST00000481739 BLOC1S1P78537 153 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 ADIPOQQ15848 244 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 BOLLQ8N9W6 283 aaKnown RBP13.13□□□□□ -0.31
RXRA-202ENST00000481739 OR52L2PQ8NGH6 319 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 MARC2Q969Z3 335 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 SMIM8Q96KF7 97 aa13.13□□□□□ -0.31
RXRA-202ENST00000481739 HSD17B10Q99714 261 aaKnown RBP13.13□□□□□ -0.31
RXRA-202ENST00000481739 PARP12Q9H0J9 701 aaKnown RBP13.13□□□□□ -0.31
RXRA-202ENST00000481739 CHD3Q12873 2000 aaKnown RBP13.13□□□□□ -0.31
RXRA-202ENST00000481739 C17orf100A8MU93 164 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 FAM90A26D6RGX4 464 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 F2RL2O00254 374 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 ITGB1BP1O14713 200 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 YPEL1O60688 119 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 C1QL1O75973 258 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 OR4A8P0C604 315 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 EWSR1Q01844 656 aaKnown RBP eCLIP13.12□□□□□ -0.318e-7■■■■■ 29.3
RXRA-202ENST00000481739 EIF4EBP1Q13541 118 aaPredicted RBP13.12□□□□□ -0.31
RXRA-202ENST00000481739 EDDM3AQ14507 147 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 TEX36Q5VZQ5 186 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 STUMQ69YW2 141 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 STPG2Q8N412 459 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 UBALD1Q8TB05 177 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 CD300LFQ8TDQ1 290 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 GPR146Q96CH1 333 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 YPEL2Q96QA6 119 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 EGLN1Q9GZT9 426 aa13.12□□□□□ -0.31
RXRA-202ENST00000481739 SHISA9B4DS77 424 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 SSSCA1O60232 199 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 PPP1CCP36873 323 aaKnown RBP13.11□□□□□ -0.31
RXRA-202ENST00000481739 RAB5CP51148 216 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 CAV2P51636 162 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 ZNF585BQ52M93 769 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 CXorf66Q5JRM2 361 aaPredicted RBP13.11□□□□□ -0.31
RXRA-202ENST00000481739 IL34Q6ZMJ4 242 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 C1orf87Q8N0U7 546 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 GINS3Q9BRX5 216 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 ZNF665Q9H7R5 613 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 RNF115Q9Y4L5 304 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 WSB1Q9Y6I7 421 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 ZNF705EA8MWA4 302 aaPredicted RBP13.11□□□□□ -0.31
RXRA-202ENST00000481739 RPL23AP62750 156 aaKnown RBP13.11□□□□□ -0.31
RXRA-202ENST00000481739 HOXA4Q00056 320 aaPredicted RBP13.11□□□□□ -0.31
RXRA-202ENST00000481739 NEUROG1Q92886 237 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 MMP26Q9NRE1 261 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 MMP24Q9Y5R2 645 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 ZNF462Q96JM2 2506 aa13.11□□□□□ -0.31
RXRA-202ENST00000481739 ROS1P08922 2347 aa13.1□□□□□ -0.31
RXRA-202ENST00000481739 IGKV1-39P01597 117 aa13.1□□□□□ -0.31
RXRA-202ENST00000481739 IGKV1D-39P04432 117 aa13.1□□□□□ -0.31
RXRA-202ENST00000481739 ZNF16P17020 682 aaPredicted RBP13.1□□□□□ -0.31
RXRA-202ENST00000481739 TAS2R30P59541 319 aa13.1□□□□□ -0.31
RXRA-202ENST00000481739 SPRNQ5BIV9 151 aa13.1□□□□□ -0.31
RXRA-202ENST00000481739 DMRTC2Q8IXT2 367 aaPredicted RBP13.1□□□□□ -0.31
RXRA-202ENST00000481739 TMEM252Q8N6L7 170 aa13.1□□□□□ -0.31
RXRA-202ENST00000481739 TPRX1Q8N7U7 411 aa13.1□□□□□ -0.31
RXRA-202ENST00000481739 AGMATQ9BSE5 352 aa13.1□□□□□ -0.31
RXRA-202ENST00000481739 SMIM3Q9BZL3 60 aa13.1□□□□□ -0.31
RXRA-202ENST00000481739 PARP11Q9NR21 331 aa13.1□□□□□ -0.31
RXRA-202ENST00000481739 GNG12Q9UBI6 72 aa13.1□□□□□ -0.31
RXRA-202ENST00000481739 CACNG5Q9UF02 275 aa13.1□□□□□ -0.31
RXRA-202ENST00000481739 ARID1AO14497 2285 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 IGHV3OR15-7A0A075B7D8 119 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 E7EQL1 145 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 PLAUP00749 431 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 TFF1P04155 84 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 CD80P33681 288 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 RAB7AP51149 207 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 STX12Q86Y82 276 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 ZNRF1Q8ND25 227 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 OR1S2Q8NGQ3 325 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 TRGV10A0A0A0MS01 117 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 A0A0G2JRQ6 117 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 NKX6-3A6NJ46 265 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 TOR1AO14656 332 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 SIAH2O43255 324 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms