RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 TAS2R41P59536 307 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 TAS2R43P59537 309 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 TWIST1Q15672 202 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 GSG1Q2KHT4 349 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 GUSBP11Q6P575 273 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 C22orf39Q6P5X5 142 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 STK40Q8N2I9 435 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 SLC35F6Q8N357 371 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 MUC15Q8N387 334 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 CCDC112Q8NEF3 446 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 OR4M1Q8NGD0 313 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 NT5CQ8TCD5 201 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 TMEM190Q8WZ59 177 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 MARC2Q969Z3 335 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 TMEM230Q96A57 120 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 MROQ9BYG7 248 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 SLC25A39Q9BZJ4 359 aaPredicted RBP2.43□□□□□ -2.02
SMC6-208ENST00000481708 PLEKHF2Q9H8W4 249 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 SDF2L1Q9HCN8 221 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 FAM206AQ9NX38 181 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 GLTPQ9NZD2 209 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 ZNF223Q9UK11 482 aaPredicted RBP2.43□□□□□ -2.02
SMC6-208ENST00000481708 SIGLEC7Q9Y286 467 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 PCYT1BQ9Y5K3 369 aaPredicted RBP2.43□□□□□ -2.02
SMC6-208ENST00000481708 V9GYQ6 96 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 PCLOQ9Y6V0 5065 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 PCNX1Q96RV3 2341 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 ANKRD17O75179 2603 aaKnown RBP2.43□□□□□ -2.02
SMC6-208ENST00000481708 H3BP45 60 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 OMPP47874 163 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 GCLMP48507 274 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 DEFA1P59665 94 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 IGLV3-21P80748 117 aaPredicted RBP2.42□□□□□ -2.02
SMC6-208ENST00000481708 PAFAH1B3Q15102 231 aaKnown RBP2.42□□□□□ -2.02
SMC6-208ENST00000481708 TMEM255AQ5JRV8 349 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 OR6Q1Q8NGQ2 317 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 OR4X1Q8NH49 305 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 SLC17A9Q9BYT1 436 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 IDI2-AS1Q9NZ38 188 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 ARL5AQ9Y689 179 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 A0A0G2JN53 185 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 DAPL1A0PJW8 107 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 ZNF850A8MQ14 1090 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 CRXO43186 299 aaPredicted RBP2.42□□□□□ -2.02
SMC6-208ENST00000481708 NANOS2P60321 138 aaKnown RBP2.42□□□□□ -2.02
SMC6-208ENST00000481708 RSU1Q15404 277 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 LRRC36Q1X8D7 754 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 BLNKQ8WV28 456 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 CEP19Q96LK0 163 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 EMC6Q9BV81 110 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 BATF3Q9NR55 127 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 CARHSP1Q9Y2V2 147 aaKnown RBP2.42□□□□□ -2.02
SMC6-208ENST00000481708 IGKV3D-11A0A0A0MRZ8 115 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 LOC285095A0A1B0GVY8 99 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 H7C0C1 242 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 DHFRP00374 187 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 PRSS1P07477 247 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 CHTF8P0CG12 524 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 IGHV3-43DP0DP04 118 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 HTR1EP28566 365 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 KIF26BQ2KJY2 2108 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 RSPO1Q2MKA7 263 aaPredicted RBP2.42□□□□□ -2.02
SMC6-208ENST00000481708 PAGE3Q5JUK9 113 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 CEMP1Q6PRD7 247 aaPredicted RBP2.42□□□□□ -2.02
SMC6-208ENST00000481708 SMIM15Q7Z3B0 74 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 ZNF567Q8N184 647 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 CHST4Q8NCG5 386 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 NUP37Q8NFH4 326 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 CPNE2Q96FN4 548 aaPredicted RBP2.42□□□□□ -2.02
SMC6-208ENST00000481708 FAM210BQ96KR6 192 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 TBX5Q99593 518 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 SELENOIQ9C0D9 397 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 CDC42EP4Q9H3Q1 356 aaKnown RBP2.42□□□□□ -2.02
SMC6-208ENST00000481708 ZDHHC11Q9H8X9 412 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 TRAPPC4Q9Y296 219 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 RYR1P21817 5038 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 PIKFYVEQ9Y2I7 2098 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 TRAV8-4A0A0B4J246 113 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 ZNF729A6NN14 1252 aaPredicted RBP2.42□□□□□ -2.02
SMC6-208ENST00000481708 PMS2P5A8MQ11 134 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 F5H5K5 113 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 NDUFA2O43678 99 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 MED6O75586 246 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 LHBP01229 141 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 IGLV2-8P01709 118 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 P01737 135 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 ZNF30P17039 623 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 PSMB1P20618 241 aaKnown RBP2.42□□□□□ -2.02
SMC6-208ENST00000481708 CCR7P32248 378 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 HSPA9P38646 679 aaKnown RBP2.42□□□□□ -2.02
SMC6-208ENST00000481708 SELENOTP62341 195 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 TMED2Q15363 201 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 PRR4Q16378 134 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 C6orf99Q4VX62 202 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 AKIRIN2Q53H80 203 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 OGFRL1Q5TC84 451 aaPredicted RBP2.42□□□□□ -2.02
SMC6-208ENST00000481708 ZNF485Q8NCK3 441 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 OR10Z1Q8NGY1 313 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 OR51Q1Q8NH59 317 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 NEIL3Q8TAT5 605 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms