RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 OR6M1Q8NGM8 313 aa14.46□□□□□ -0.09
CLK1-211ENST00000481641 MYOZ3Q8TDC0 251 aa14.46□□□□□ -0.09
CLK1-211ENST00000481641 ABHD14BQ96IU4 210 aa14.46□□□□□ -0.09
CLK1-211ENST00000481641 PRR25Q96S07 402 aa14.46□□□□□ -0.09
CLK1-211ENST00000481641 B9D2Q9BPU9 175 aa14.46□□□□□ -0.09
CLK1-211ENST00000481641 STEAP1Q9UHE8 339 aa14.46□□□□□ -0.09
CLK1-211ENST00000481641 ZNF580Q9UK33 172 aa14.46□□□□□ -0.09
CLK1-211ENST00000481641 SEC14L6B5MCN3 397 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 CT45A6P0DMU7 189 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 CT45A5P0DMU8 189 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 CT45A7P0DMV0 189 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 OR5H8P0DN80 308 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 SNRPBP14678 240 aaKnown RBP14.45□□□□□ -0.1
CLK1-211ENST00000481641 NDPQ00604 133 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 LIN54Q6MZP7 749 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 ZNF491Q8N8L2 437 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 NPBQ8NG41 125 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 FBXL15Q9H469 300 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 PLGRKTQ9HBL7 147 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 OR1A1Q9P1Q5 309 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 SLC23A1Q9UHI7 598 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 SCOCQ9UIL1 159 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 FBXO7Q9Y3I1 522 aa14.45□□□□□ -0.1
CLK1-211ENST00000481641 TRAV41A0A0B4J266 112 aa14.44□□□□□ -0.1
CLK1-211ENST00000481641 NDUFA3O95167 84 aa14.44□□□□□ -0.1
CLK1-211ENST00000481641 CLDN12P56749 244 aa14.44□□□□□ -0.1
CLK1-211ENST00000481641 TPBGQ13641 420 aa14.44□□□□□ -0.1
CLK1-211ENST00000481641 FHL3Q13643 280 aa14.44□□□□□ -0.1
CLK1-211ENST00000481641 C9orf66Q5T8R8 295 aa14.44□□□□□ -0.1
CLK1-211ENST00000481641 ASPHD1Q5U4P2 390 aa14.44□□□□□ -0.1
CLK1-211ENST00000481641 TMEM65Q6PI78 240 aa14.44□□□□□ -0.1
CLK1-211ENST00000481641 DUSP21Q9H596 190 aa14.44□□□□□ -0.1
CLK1-211ENST00000481641 PIPOXQ9P0Z9 390 aa14.44□□□□□ -0.1
CLK1-211ENST00000481641 KIAA1456Q9P272 454 aa14.44□□□□□ -0.1
CLK1-211ENST00000481641 TPRKBQ9Y3C4 175 aa14.44□□□□□ -0.1
CLK1-211ENST00000481641 I3L521 148 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 FCN1O00602 326 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 SLC17A2O00624 439 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 RAB29O14966 203 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 RGS10O43665 173 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 IGLV1-40P01703 118 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 SCTP09683 121 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 ARSBP15848 533 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 CEACAM6P40199 344 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 ECI1P42126 302 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 MAP2K4P45985 399 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 TMEM50BP56557 158 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 GNB1P62873 340 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 ECSCRQ19T08 205 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 FAM89BQ8N5H3 189 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 OR1N2Q8NGR9 330 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 CASTOR1Q8WTX7 329 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 CHCHD6Q9BRQ6 235 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 URM1Q9BTM9 101 aaKnown RBP14.43□□□□□ -0.1
CLK1-211ENST00000481641 CCDC90BQ9GZT6 254 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 C11orf54Q9H0W9 315 aaPredicted RBP14.43□□□□□ -0.1
CLK1-211ENST00000481641 RNF150Q9ULK6 438 aa14.43□□□□□ -0.1
CLK1-211ENST00000481641 TRBV6-6A0A0A6YYG2 114 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 FOXI3A8MTJ6 420 aaPredicted RBP14.42□□□□□ -0.1
CLK1-211ENST00000481641 H0YJW9 148 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 VEGFCP49767 419 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 RAB9AP51151 201 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 LINC00205P59089 165 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 HLA-DRB3P79483 266 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 PLA2G7Q13093 441 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 RAB11BQ15907 218 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 ZNF260Q3ZCT1 412 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 FAM71F2Q6NXP2 309 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 MOB1BQ7L9L4 216 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 MINDY2Q8NBR6 621 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 ARHGAP5-AS1Q96IT6 56 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 UBE2E2Q96LR5 201 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 AGMATQ9BSE5 352 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 ALX4Q9H161 411 aaPredicted RBP14.42□□□□□ -0.1
CLK1-211ENST00000481641 VSIG4Q9Y279 399 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 A3GALT2U3KPV4 340 aa14.42□□□□□ -0.1
CLK1-211ENST00000481641 H7C2Y5 167 aa14.41□□□□□ -0.1
CLK1-211ENST00000481641 RRHO14718 337 aa14.41□□□□□ -0.1
CLK1-211ENST00000481641 SOX15O60248 233 aa14.41□□□□□ -0.1
CLK1-211ENST00000481641 RAMP3O60896 148 aa14.41□□□□□ -0.1
CLK1-211ENST00000481641 CPEP16870 476 aa14.41□□□□□ -0.1
CLK1-211ENST00000481641 CALRP27797 417 aaKnown RBP14.41□□□□□ -0.1
CLK1-211ENST00000481641 CX3CL1P78423 397 aa14.41□□□□□ -0.1
CLK1-211ENST00000481641 FABP5Q01469 135 aa14.41□□□□□ -0.1
CLK1-211ENST00000481641 DRAXINQ8NBI3 349 aaPredicted RBP14.41□□□□□ -0.1
CLK1-211ENST00000481641 CLCC1Q96S66 551 aa14.41□□□□□ -0.1
CLK1-211ENST00000481641 PECRQ9BY49 303 aa14.41□□□□□ -0.1
CLK1-211ENST00000481641 RIMS4Q9H426 269 aaPredicted RBP14.41□□□□□ -0.1
CLK1-211ENST00000481641 Q9N2K0 584 aa14.41□□□□□ -0.1
CLK1-211ENST00000481641 ZMAT5Q9UDW3 170 aaKnown RBP14.41□□□□□ -0.1
CLK1-211ENST00000481641 GAB2Q9UQC2 676 aa14.41□□□□□ -0.1
CLK1-211ENST00000481641 LSM4Q9Y4Z0 139 aaKnown RBP14.41□□□□□ -0.1
CLK1-211ENST00000481641 NBEAL2Q6ZNJ1 2754 aa14.41□□□□□ -0.1
CLK1-211ENST00000481641 IGKV1-6A0A0C4DH72 117 aa14.4□□□□□ -0.1
CLK1-211ENST00000481641 A0A1W2PN81 502 aa14.4□□□□□ -0.1
CLK1-211ENST00000481641 HSPA12AO43301 675 aa14.4□□□□□ -0.1
CLK1-211ENST00000481641 PROP1O75360 226 aa14.4□□□□□ -0.1
CLK1-211ENST00000481641 GSTP1P09211 210 aaKnown RBP14.4□□□□□ -0.1
CLK1-211ENST00000481641 EGR2P11161 476 aaPredicted RBP14.4□□□□□ -0.1
CLK1-211ENST00000481641 CHRNA7P36544 502 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms