RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	M6PR	P20645	277 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	GRPR	P30550	384 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	ALDH3A1	P30838	453 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	PSMB3	P49720	205 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	RPL14	P50914	215 aa	Known RBP	0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	TAS2R45	P59539	299 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	HOXC5	Q00444	222 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	FABP5	Q01469	135 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	MGAT3	Q09327	533 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	SMAGP	Q0VAQ4	97 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	CASP8	Q14790	479 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	RGS21	Q2M5E4	152 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	TRMT12	Q53H54	448 aa	Known RBP	0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	SPIN4	Q56A73	249 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	CLVS2	Q5SYC1	327 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	LRRN1	Q6UXK5	716 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	RASSF6	Q6ZTQ3	369 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	CLEC20A	Q6ZU45	233 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	HIST2H3A	Q71DI3	136 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	VN1R4	Q7Z5H5	301 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	DOLPP1	Q86YN1	238 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	EIF4E3	Q8N5X7	224 aa	Known RBP	0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	ZFP62	Q8NB50	900 aa	Predicted RBP	0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR2K2	Q8NGT1	345 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR4K13	Q8NH42	304 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR4A5	Q8NH83	315 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	GPR119	Q8TDV5	335 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173		Q8WTZ3	238 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	KCTD4	Q8WVF5	259 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	RNF133	Q8WVZ7	376 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	TESC	Q96BS2	214 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	C12orf43	Q96C57	262 aa	Known RBP	0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	FXYD5	Q96DB9	178 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	MGLL	Q99685	303 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	MRO	Q9BYG7	248 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	SLC19A3	Q9BZV2	496 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	MED28	Q9H204	178 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR51I2	Q9H344	312 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	LRRC19	Q9H756	370 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	TXNL4B	Q9NX01	149 aa	Known RBP	0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	UBAP1	Q9NZ09	502 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	RPUSD1	Q9UJJ7	312 aa	Known RBP	0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	C3orf18	Q9UK00	162 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	VPREB3	Q9UKI3	123 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	POLR1D	Q9Y2S0	133 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	HDGFL3	Q9Y3E1	203 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	ABCC11	Q96J66	1382 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	C9orf84	Q5VXU9	1444 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	SPATA31E1	Q6ZUB1	1445 aa		0.77	□□□□□ -2.29
CCNL1-223	ENST00000481173	BRD4	O60885	1362 aa	Predicted RBP	0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	EVC2	Q86UK5	1308 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	TINCR	A0A1B0GVN0	87 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173		A0A1B0GW54	56 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	DHRS12	A0PJE2	317 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173		A8MWP6	167 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	GGTLC3	B5MD39	225 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	DISC1	C4P0D8	188 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173		H0Y980	276 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173		H3BMM0	161 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	ISLR	O14498	428 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	UBFD1	O14562	309 aa	Known RBP	0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	UBE2L6	O14933	153 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	ADAP1	O75689	374 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	RPP14	O95059	124 aa	Known RBP	0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	CDS2	O95674	445 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	EPPIN	O95925	133 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	MT-CO2	P00403	227 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	IGKV1D-33	P01593	117 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	IGKV1-33	P01594	117 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	OPN1SW	P03999	348 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	TYMS	P04818	313 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	CALB1	P05937	261 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	CD7	P09564	240 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	FAM228B	P0C875	321 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	C8orf88	P0DMB2	117 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173		P0DMU3	169 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	FAM231A	P0DMU4	169 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	FAM231C	P0DMU5	169 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR13C7	P0DN81	318 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	GABRA1	P14867	456 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	SLC25A16	P16260	332 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	ZNF708	P17019	499 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	ORM2	P19652	201 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	MIP	P30301	263 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	CA7	P43166	264 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	LPAR6	P43657	344 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	OMP	P47874	163 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	FOXA1	P55317	472 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	RWDD2B	P57060	319 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	ACTB	P60709	375 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	DYNLL1	P63167	89 aa	Known RBP	0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	ACTG1	P63261	375 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	GNA12	Q03113	381 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	ITGB3BP	Q13352	177 aa	Predicted RBP	0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	PPP1R1A	Q13522	171 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	APOF	Q13790	326 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	GNA13	Q14344	377 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	PDGFRL	Q15198	375 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	HIST3H3	Q16695	136 aa		0.76	□□□□□ -2.29
CCNL1-223	ENST00000481173	AKIRIN2	Q53H80	203 aa		0.76	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms