RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 CKLFQ9UBR5 152 aa5.03□□□□□ -1.6
LRCH3-216ENST00000481048 TRAPPC2LQ9UL33 140 aa5.03□□□□□ -1.6
LRCH3-216ENST00000481048 U3KQK5 164 aa5.03□□□□□ -1.6
LRCH3-216ENST00000481048 DNAH9Q9NYC9 4486 aa5.03□□□□□ -1.6
LRCH3-216ENST00000481048 IGHV3-72A0A0B4J1Y9 119 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 TRBV5-5A0A0J9YX44 114 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 A0A1W2PPE3 182 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 SEC14L6B5MCN3 397 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 H3BNX3 289 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 SC5DO75845 299 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 RGS11O94810 467 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 OR8U8P0C7N1 319 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 PPIFP30405 207 aaKnown RBP5.02□□□□□ -1.61
LRCH3-216ENST00000481048 VHLP40337 213 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 REG1BP48304 166 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 SOX2P48431 317 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 F2RL1P55085 397 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 RAB25P57735 213 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 TAS2R43P59537 309 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 KRTAP10-7P60409 375 aaPredicted RBP5.02□□□□□ -1.61
LRCH3-216ENST00000481048 HTD2P86397 168 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 RIPK1Q13546 671 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 Q499Y3 187 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 MORN2Q502X0 79 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 YIF1BQ5BJH7 314 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 CT45A1Q5HYN5 189 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 PLAC9Q5JTB6 97 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 TMEM65Q6PI78 240 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 ZNF439Q8NDP4 499 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 ZNF555Q8NEP9 628 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 OR11H1Q8NG94 326 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 CT45A3Q8NHU0 189 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 MYOZ3Q8TDC0 251 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 NEK7Q8TDX7 302 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 RGP1Q92546 391 aaPredicted RBP5.02□□□□□ -1.61
LRCH3-216ENST00000481048 THRSPQ92748 146 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 KCTD7Q96MP8 289 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 ZNF184Q99676 751 aaPredicted RBP5.02□□□□□ -1.61
LRCH3-216ENST00000481048 GHITMQ9H3K2 345 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 ETAA1Q9NY74 926 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 KCNIP1Q9NZI2 227 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 RCC2Q9P258 522 aaKnown RBP5.02□□□□□ -1.61
LRCH3-216ENST00000481048 GNG12Q9UBI6 72 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 GHRLQ9UBU3 117 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 AASSQ9UDR5 926 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 VSIG4Q9Y279 399 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 ERGIC3Q9Y282 383 aa5.02□□□□□ -1.61
LRCH3-216ENST00000481048 EXOSC1Q9Y3B2 195 aaKnown RBP5.02□□□□□ -1.61
LRCH3-216ENST00000481048 KMT2CQ8NEZ4 4911 aaKnown RBP5.02□□□□□ -1.61
LRCH3-216ENST00000481048 TRAV39A0A0B4J263 110 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 C12orf77C9JDV5 145 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 I3L521 148 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 ARPC1BO15143 372 aaKnown RBP5.01□□□□□ -1.61
LRCH3-216ENST00000481048 TRIAP1O43715 76 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 YPEL1O60688 119 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 HBZP02008 142 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 MYL12AP19105 171 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 FUT3P21217 361 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 ETV1P50549 477 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 ZNF134P52741 427 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 CRIP2P52943 208 aaPredicted RBP5.01□□□□□ -1.61
LRCH3-216ENST00000481048 ZNF616Q08AN1 781 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 ZNF260Q3ZCT1 412 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 SLC22A6Q4U2R8 563 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 FAM27D1Q5T7N8 215 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 DMKNQ6E0U4 476 aaPredicted RBP5.01□□□□□ -1.61
LRCH3-216ENST00000481048 FAM71F2Q6NXP2 309 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 ZNF429Q86V71 674 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 TCTEX1D1Q8N7M0 179 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 ZNF491Q8N8L2 437 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 NPBQ8NG41 125 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 CHAC2Q8WUX2 184 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 CCDC107Q8WV48 283 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 APH1BQ8WW43 257 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 GHSRQ92847 366 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 DUX3Q96PT4 197 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 YPEL2Q96QA6 119 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 SLC29A1Q99808 456 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 HSPB9Q9BQS6 159 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 ZNF251Q9BRH9 671 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 UQCC2Q9BRT2 126 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 OR2S2Q9NQN1 319 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 ZNF581Q9P0T4 197 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 ZNF107Q9UII5 783 aaPredicted RBP5.01□□□□□ -1.61
LRCH3-216ENST00000481048 JPT1Q9UK76 154 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 DIMT1Q9UNQ2 313 aaKnown RBP5.01□□□□□ -1.61
LRCH3-216ENST00000481048 ZNF256Q9Y2P7 627 aaPredicted RBP5.01□□□□□ -1.61
LRCH3-216ENST00000481048 MRPS28Q9Y2Q9 187 aaKnown RBP5.01□□□□□ -1.61
LRCH3-216ENST00000481048 PEX16Q9Y5Y5 336 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 SMAD5-AS1Q9Y6J3 95 aa5.01□□□□□ -1.61
LRCH3-216ENST00000481048 TRBV5-7A0A0A0MS05 114 aa5□□□□□ -1.61
LRCH3-216ENST00000481048 IGHV3-43A0A0B4J1X8 118 aa5□□□□□ -1.61
LRCH3-216ENST00000481048 A0A1W2PP11 408 aa5□□□□□ -1.61
LRCH3-216ENST00000481048 ZNF736B4DX44 427 aaPredicted RBP5□□□□□ -1.61
LRCH3-216ENST00000481048 SLC31A2O15432 143 aa5□□□□□ -1.61
LRCH3-216ENST00000481048 WBP4O75554 376 aaKnown RBP5□□□□□ -1.61
LRCH3-216ENST00000481048 HLA-DRB1P01911 266 aa5□□□□□ -1.61
LRCH3-216ENST00000481048 IGHV3-43DP0DP04 118 aa5□□□□□ -1.61
LRCH3-216ENST00000481048 MAPK3P27361 379 aaPredicted RBP5□□□□□ -1.61
LRCH3-216ENST00000481048 CAPGP40121 348 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms