RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 BEAN1Q3B7T3 259 aa13.41□□□□□ -0.26
HSPG2-209ENST00000480900 OR10R2Q8NGX6 335 aa13.41□□□□□ -0.26
HSPG2-209ENST00000480900 GON7Q9BXV9 100 aa13.41□□□□□ -0.26
HSPG2-209ENST00000480900 PARP12Q9H0J9 701 aaKnown RBP13.41□□□□□ -0.26
HSPG2-209ENST00000480900 LINC00527Q9UJ94 153 aa13.41□□□□□ -0.26
HSPG2-209ENST00000480900 KCNK7Q9Y2U2 307 aa13.41□□□□□ -0.26
HSPG2-209ENST00000480900 A0A0B4J203 849 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 METTL21EPA6NDL7 271 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 NOTOA8MTQ0 251 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 TRDCB7Z8K6 153 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 RAB27BO00194 218 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 PF4P02776 101 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 SCTP09683 121 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 CD3GP09693 182 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 SOX6P35712 828 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 CEACAM6P40199 344 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 ACTBP60709 375 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 RPL23AP62750 156 aaKnown RBP13.4□□□□□ -0.26
HSPG2-209ENST00000480900 MRPS15P82914 257 aaKnown RBP13.4□□□□□ -0.26
HSPG2-209ENST00000480900 MMDQ15546 238 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 MOGAT2Q3SYC2 334 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 KCTD21Q4G0X4 260 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 TPRA1Q86W33 373 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 WFDC9Q8NEX5 89 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 ZNF251Q9BRH9 671 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 AGMATQ9BSE5 352 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 OR1A1Q9P1Q5 309 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 ZNF580Q9UK33 172 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 SSR3Q9UNL2 185 aa13.4□□□□□ -0.26
HSPG2-209ENST00000480900 RRP15Q9Y3B9 282 aaKnown RBP13.4□□□□□ -0.26
HSPG2-209ENST00000480900 PRKDCP78527 4128 aaKnown RBP13.39□□□□□ -0.27
HSPG2-209ENST00000480900 MFNGO00587 321 aa13.39□□□□□ -0.27
HSPG2-209ENST00000480900 RRP9O43818 475 aaKnown RBP13.39□□□□□ -0.27
HSPG2-209ENST00000480900 HIST1H1DP16402 221 aaKnown RBP13.39□□□□□ -0.27
HSPG2-209ENST00000480900 CD33P20138 364 aa13.39□□□□□ -0.27
HSPG2-209ENST00000480900 SLC6A1P30531 599 aa13.39□□□□□ -0.27
HSPG2-209ENST00000480900 TEX38Q6PEX7 206 aa13.39□□□□□ -0.27
HSPG2-209ENST00000480900 OR4A4PQ8NGN8 299 aa13.39□□□□□ -0.27
HSPG2-209ENST00000480900 PHF21AQ96BD5 680 aa13.39□□□□□ -0.27
HSPG2-209ENST00000480900 RBMXL1Q96E39 390 aaKnown RBP13.39□□□□□ -0.27
HSPG2-209ENST00000480900 HSPB9Q9BQS6 159 aa13.39□□□□□ -0.27
HSPG2-209ENST00000480900 C11orf54Q9H0W9 315 aaPredicted RBP13.39□□□□□ -0.27
HSPG2-209ENST00000480900 ZFP57Q9NU63 452 aa13.39□□□□□ -0.27
HSPG2-209ENST00000480900 IGKV1-6A0A0C4DH72 117 aa13.38□□□□□ -0.27
HSPG2-209ENST00000480900 OR5H14A6NHG9 310 aa13.38□□□□□ -0.27
HSPG2-209ENST00000480900 NBR2O15453 112 aa13.38□□□□□ -0.27
HSPG2-209ENST00000480900 DIRAS3O95661 229 aa13.38□□□□□ -0.27
HSPG2-209ENST00000480900 FCGR3AP08637 254 aa13.38□□□□□ -0.27
HSPG2-209ENST00000480900 SLC2A2P11168 524 aaPredicted RBP13.38□□□□□ -0.27
HSPG2-209ENST00000480900 SERPINB10P48595 397 aa13.38□□□□□ -0.27
HSPG2-209ENST00000480900 KIR2DS1Q14954 304 aa13.38□□□□□ -0.27
HSPG2-209ENST00000480900 PNLIPRP3Q17RR3 467 aa13.38□□□□□ -0.27
HSPG2-209ENST00000480900 RPL39P5Q59GN2 51 aa13.38□□□□□ -0.27
HSPG2-209ENST00000480900 ABHD14BQ96IU4 210 aa13.38□□□□□ -0.27
HSPG2-209ENST00000480900 ZNF107Q9UII5 783 aaPredicted RBP13.38□□□□□ -0.27
HSPG2-209ENST00000480900 SMIM30A4D0T7 59 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 FABP7O15540 132 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 HLA-DRB1P01911 266 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 IGF1P05019 195 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 CT45A6P0DMU7 189 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 CT45A5P0DMU8 189 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 CT45A7P0DMV0 189 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 GNB3P16520 340 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 ARL6IP1Q15041 203 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 OXLD1Q5BKU9 147 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 FAM131AQ6UXB0 335 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 NPBQ8NG41 125 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 RITA1Q96K30 269 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 KCTD7Q96MP8 289 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 CHCHD6Q9BRQ6 235 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 CABLES2Q9BTV7 478 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 TOLLIPQ9H0E2 274 aa13.37□□□□□ -0.27
HSPG2-209ENST00000480900 A0A075B6Q4 140 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 RBBP9O75884 186 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 NDUFA3O95167 84 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 ELANEP08246 267 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 CNTFRP26992 372 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 MC5RP33032 325 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 FOXE3Q13461 319 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 NEDD8Q15843 81 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 C5orf64Q2M2E5 130 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 CXorf66Q5JRM2 361 aaPredicted RBP13.36□□□□□ -0.27
HSPG2-209ENST00000480900 RNF152Q8N8N0 203 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 OR5AN1Q8NGI8 311 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 ATG5Q9H1Y0 275 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 OR51E2Q9H255 320 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.36□□□□□ -0.27
HSPG2-209ENST00000480900 RDH8Q9NYR8 311 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 KIAA1456Q9P272 454 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 ZNF221Q9UK13 617 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 WASHC3Q9Y3C0 194 aa13.36□□□□□ -0.27
HSPG2-209ENST00000480900 TNCP24821 2201 aa13.35□□□□□ -0.27
HSPG2-209ENST00000480900 NUDT19A8MXV4 375 aa13.35□□□□□ -0.27
HSPG2-209ENST00000480900 H0YJW9 148 aa13.35□□□□□ -0.27
HSPG2-209ENST00000480900 OR5H8P0DN80 308 aa13.35□□□□□ -0.27
HSPG2-209ENST00000480900 VDAC1P21796 283 aa13.35□□□□□ -0.27
HSPG2-209ENST00000480900 SDC2P34741 201 aa13.35□□□□□ -0.27
HSPG2-209ENST00000480900 CFHR3Q02985 330 aa13.35□□□□□ -0.27
HSPG2-209ENST00000480900 ARFRP1Q13795 201 aa13.35□□□□□ -0.27
HSPG2-209ENST00000480900 SRSF7Q16629 238 aaKnown RBP eCLIP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms