RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 TRAV1-2A0A0B4J238 106 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 DENRO43583 198 aaKnown RBP9.01□□□□□ -0.97
CCM2-213ENST00000480658 SPDEFO95238 335 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 PSMB8P28062 276 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 TMEM267Q0VDI3 215 aaPredicted RBP9.01□□□□□ -0.97
CCM2-213ENST00000480658 INSL4Q14641 139 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 PLGLAQ15195 96 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 LIN54Q6MZP7 749 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 C8orf86Q6ZUL3 223 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 NPBQ8NG41 125 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 OR52L2PQ8NGH6 319 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 OR4A4PQ8NGN8 299 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 PTX4Q96A99 478 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 FAM3DQ96BQ1 224 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 UBE2E2Q96LR5 201 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 P2RX4Q99571 388 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 NABP2Q9BQ15 211 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 CMSS1Q9BQ75 279 aaKnown RBP9.01□□□□□ -0.97
CCM2-213ENST00000480658 IFI27L2Q9H2X8 130 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 NDUFB11Q9NX14 153 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 ZNF221Q9UK13 617 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 RAB22AQ9UL26 194 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 WASHC3Q9Y3C0 194 aa9.01□□□□□ -0.97
CCM2-213ENST00000480658 CMYA5Q8N3K9 4069 aa9□□□□□ -0.97
CCM2-213ENST00000480658 CCL24O00175 119 aa9□□□□□ -0.97
CCM2-213ENST00000480658 ARPC1BO15143 372 aaKnown RBP9□□□□□ -0.97
CCM2-213ENST00000480658 NDUFA3O95167 84 aa9□□□□□ -0.97
CCM2-213ENST00000480658 APOA2P02652 100 aa9□□□□□ -0.97
CCM2-213ENST00000480658 GSTP1P09211 210 aaKnown RBP9□□□□□ -0.97
CCM2-213ENST00000480658 CD3GP09693 182 aa9□□□□□ -0.97
CCM2-213ENST00000480658 OR8U8P0C7N1 319 aa9□□□□□ -0.97
CCM2-213ENST00000480658 RAB6AP20340 208 aa9□□□□□ -0.97
CCM2-213ENST00000480658 VHLP40337 213 aa9□□□□□ -0.97
CCM2-213ENST00000480658 INSL3P51460 131 aa9□□□□□ -0.97
CCM2-213ENST00000480658 CFHR3Q02985 330 aa9□□□□□ -0.97
CCM2-213ENST00000480658 GNMTQ14749 295 aa9□□□□□ -0.97
CCM2-213ENST00000480658 SSX1Q16384 188 aa9□□□□□ -0.97
CCM2-213ENST00000480658 C5orf64Q2M2E5 130 aa9□□□□□ -0.97
CCM2-213ENST00000480658 C9orf66Q5T8R8 295 aa9□□□□□ -0.97
CCM2-213ENST00000480658 ZNF660Q6AZW8 331 aaPredicted RBP9□□□□□ -0.97
CCM2-213ENST00000480658 OR10K2Q6IF99 312 aa9□□□□□ -0.97
CCM2-213ENST00000480658 TMEM91Q6ZNR0 172 aa9□□□□□ -0.97
CCM2-213ENST00000480658 PDPNQ86YL7 162 aa9□□□□□ -0.97
CCM2-213ENST00000480658 ODF3L1Q8IXM7 274 aa9□□□□□ -0.97
CCM2-213ENST00000480658 NRG4Q8WWG1 115 aa9□□□□□ -0.97
CCM2-213ENST00000480658 RAB3CQ96E17 227 aa9□□□□□ -0.97
CCM2-213ENST00000480658 CNBD2Q96M20 576 aa9□□□□□ -0.97
CCM2-213ENST00000480658 KCTD7Q96MP8 289 aa9□□□□□ -0.97
CCM2-213ENST00000480658 TSNAXQ99598 290 aaKnown RBP9□□□□□ -0.97
CCM2-213ENST00000480658 NICN1Q9BSH3 213 aa9□□□□□ -0.97
CCM2-213ENST00000480658 MRPL20Q9BYC9 149 aaKnown RBP9□□□□□ -0.97
CCM2-213ENST00000480658 OR51J1Q9H342 316 aa9□□□□□ -0.97
CCM2-213ENST00000480658 AK3Q9UIJ7 227 aa9□□□□□ -0.97
CCM2-213ENST00000480658 TRAV41A0A0B4J266 112 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 TRDCB7Z8K6 153 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 ANKRD65E5RJM6 399 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 H7C2Y5 167 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 ST8SIA5O15466 376 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 CEACAM6P40199 344 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 VEGFCP49767 419 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 F2RL1P55085 397 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 RPS25P62851 125 aaKnown RBP8.99□□□□□ -0.97
CCM2-213ENST00000480658 RUNX1Q01196 453 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 SRSF7Q16629 238 aaKnown RBP eCLIP8.99□□□□□ -0.97
CCM2-213ENST00000480658 HIST2H2BDQ6DRA6 164 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 CD200R1LQ6Q8B3 271 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 C10orf99Q6UWK7 81 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 OR5AN1Q8NGI8 311 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 YTHDF1Q9BYJ9 559 aaKnown RBP8.99□□□□□ -0.97
CCM2-213ENST00000480658 Q9N2K0 584 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 LINC00527Q9UJ94 153 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 VSIG4Q9Y279 399 aa8.99□□□□□ -0.97
CCM2-213ENST00000480658 AK6Q9Y3D8 172 aaKnown RBP8.99□□□□□ -0.97
CCM2-213ENST00000480658 TRDV1A0A1B0GX56 115 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 IFITM5A6NNB3 132 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 ZNF736B4DX44 427 aaPredicted RBP8.98□□□□□ -0.97
CCM2-213ENST00000480658 RRHO14718 337 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 CREBL2O60519 120 aaPredicted RBP8.98□□□□□ -0.97
CCM2-213ENST00000480658 RPLP1P05386 114 aaKnown RBP8.98□□□□□ -0.97
CCM2-213ENST00000480658 SLC2A2P11168 524 aaPredicted RBP8.98□□□□□ -0.97
CCM2-213ENST00000480658 RAB3BP20337 219 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 TALDO1P37837 337 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 CRIP2P52943 208 aaPredicted RBP8.98□□□□□ -0.97
CCM2-213ENST00000480658 DGCR2P98153 550 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 FABP5Q01469 135 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 C2orf76Q3KRA6 126 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 ETV3LQ6ZN32 361 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 OR10J5Q8NHC4 309 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 MYOZ3Q8TDC0 251 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 ARHGAP5-AS1Q96IT6 56 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 TMEM68Q96MH6 324 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 HSPB9Q9BQS6 159 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 AGMATQ9BSE5 352 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 PECRQ9BY49 303 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 SLA2Q9H6Q3 261 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 PARP11Q9NR21 331 aa8.98□□□□□ -0.97
CCM2-213ENST00000480658 TGP01266 2768 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 FOXI3A8MTJ6 420 aaPredicted RBP8.97□□□□□ -0.97
CCM2-213ENST00000480658 H0YJW9 148 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 SOCS1O15524 211 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms