RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SIRPDQ9H106 197 aa14.36□□□□□ -0.11
UPF3A-206ENST00000480362 IFI27L2Q9H2X8 130 aa14.36□□□□□ -0.11
UPF3A-206ENST00000480362 SIRT7Q9NRC8 400 aa14.36□□□□□ -0.11
UPF3A-206ENST00000480362 ZNRD1Q9P1U0 126 aa14.36□□□□□ -0.11
UPF3A-206ENST00000480362 INSIG2Q9Y5U4 225 aa14.36□□□□□ -0.11
UPF3A-206ENST00000480362 IGHV2-26A0A0B4J1V2 119 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 TEX13DA0A0J9YY54 714 aaPredicted RBP14.35□□□□□ -0.11
UPF3A-206ENST00000480362 CRYM-AS1A6NIL9 109 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 TOR1AO14656 332 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 TNFSF12O43508 249 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 PGLYRP1O75594 196 aaPredicted RBP14.35□□□□□ -0.11
UPF3A-206ENST00000480362 CD34P28906 385 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 UBE2MP61081 183 aaKnown RBP14.35□□□□□ -0.11
UPF3A-206ENST00000480362 RND3P61587 244 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 CBX3Q13185 183 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 MSMO1Q15800 293 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 VMO1Q7Z5L0 202 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 SGPP2Q8IWX5 399 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 LYG1Q8N1E2 194 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 LINC00311Q8N616 119 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 ZBTB34Q8NCN2 500 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 WFDC11Q8NEX6 87 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 OR13D1Q8NGV5 346 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 ZNF596Q8TC21 504 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 RTN4IP1Q8WWV3 396 aaPredicted RBP14.35□□□□□ -0.11
UPF3A-206ENST00000480362 GHITMQ9H3K2 345 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 GPN1Q9HCN4 374 aaPredicted RBP14.35□□□□□ -0.11
UPF3A-206ENST00000480362 SDHAF2Q9NX18 166 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 GAB2Q9UQC2 676 aa14.35□□□□□ -0.11
UPF3A-206ENST00000480362 ANKRD17O75179 2603 aaKnown RBP14.35□□□□□ -0.11
UPF3A-206ENST00000480362 NBPF19A0A087WUL8 3843 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 C9orf170A2RU37 121 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 C7orf66A4D0T2 115 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 MPPED1O15442 326 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 TOX4O94842 621 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 VAMP1P23763 118 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 COX7A1P24310 79 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 S100GP29377 79 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 PRRX1P54821 245 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 PAX8Q06710 450 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 DHRS2Q13268 280 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 LYG2Q86SG7 212 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 TBC1D26Q86UD7 250 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 PNKDQ8N490 385 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 LINC01356Q8N9X3 169 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 C5orf30Q96GV9 206 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 GPHA2Q96T91 129 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 CLEC7AQ9BXN2 247 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 NAA60Q9H7X0 242 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 HEXA-AS1Q9H8Q6 139 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 APCP25054 2843 aa14.34□□□□□ -0.11
UPF3A-206ENST00000480362 SNRPGP15A8MWD9 76 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 RAB29O14966 203 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 PROP1O75360 226 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 SFT2D2O95562 160 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 HLA-AP01891 365 aaKnown RBP14.33□□□□□ -0.12
UPF3A-206ENST00000480362 MMP9P14780 707 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 SUPT4H1P63272 117 aaKnown RBP14.33□□□□□ -0.12
UPF3A-206ENST00000480362 SLC9A3R2Q15599 337 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 RPL39P5Q59GN2 51 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 HCP5Q6MZN7 132 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 ODF3L1Q8IXM7 274 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 ZNF431Q8TF32 576 aaPredicted RBP14.33□□□□□ -0.12
UPF3A-206ENST00000480362 TNFRSF14Q92956 283 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 TBX15Q96SF7 602 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 PCGF1Q9BSM1 259 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 OR51J1Q9H342 316 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 UNKLQ9H9P5 680 aaKnown RBP14.33□□□□□ -0.12
UPF3A-206ENST00000480362 PIPOXQ9P0Z9 390 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 POLQO75417 2590 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 ABCA12Q86UK0 2595 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 TACC2O95359 2948 aa14.33□□□□□ -0.12
UPF3A-206ENST00000480362 TRAV20A0A0B4J274 112 aa14.32□□□□□ -0.12
UPF3A-206ENST00000480362 CREBL2O60519 120 aaPredicted RBP14.32□□□□□ -0.12
UPF3A-206ENST00000480362 KLRD1Q13241 179 aa14.32□□□□□ -0.12
UPF3A-206ENST00000480362 DCAF12L2Q5VW00 463 aa14.32□□□□□ -0.12
UPF3A-206ENST00000480362 ZNF626Q68DY1 528 aa14.32□□□□□ -0.12
UPF3A-206ENST00000480362 C11orf88Q6PI97 169 aa14.32□□□□□ -0.12
UPF3A-206ENST00000480362 C1orf229Q6ZS94 237 aaPredicted RBP14.32□□□□□ -0.12
UPF3A-206ENST00000480362 CADM3Q8N126 398 aa14.32□□□□□ -0.12
UPF3A-206ENST00000480362 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.32□□□□□ -0.12
UPF3A-206ENST00000480362 OR10X1Q8NGY0 326 aa14.32□□□□□ -0.12
UPF3A-206ENST00000480362 CASTOR1Q8WTX7 329 aa14.32□□□□□ -0.12
UPF3A-206ENST00000480362 TMEM186Q96B77 213 aa14.32□□□□□ -0.12
UPF3A-206ENST00000480362 KCNIP3Q9Y2W7 256 aa14.32□□□□□ -0.12
UPF3A-206ENST00000480362 ASH1LQ9NR48 2969 aaKnown RBP14.32□□□□□ -0.12
UPF3A-206ENST00000480362 SAA2-SAA4A0A096LPE2 208 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 C3orf85A0A1B0GTC6 90 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 M0R1X1 148 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 IFNA2P01563 188 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 IGLV1-47P01700 117 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 SAA2P0DJI9 122 aaPredicted RBP14.31□□□□□ -0.12
UPF3A-206ENST00000480362 IGHV4-31P0DP07 118 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 BCAP31P51572 246 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 EIF4EBP1Q13541 118 aaPredicted RBP14.31□□□□□ -0.12
UPF3A-206ENST00000480362 TMEM249Q2WGJ8 235 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 HLA-DRB5Q30154 266 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 SP6Q3SY56 376 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 ZNF66Q6ZN08 573 aa14.31□□□□□ -0.12
UPF3A-206ENST00000480362 KCTD9Q7L273 389 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms