RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 GSTT2BP0CG30 244 aa16.4■□□□□ 0.22
VARS-224ENST00000479051 CD1BP29016 333 aa16.4■□□□□ 0.22
VARS-224ENST00000479051 IZUMO1Q8IYV9 350 aa16.4■□□□□ 0.22
VARS-224ENST00000479051 CMTM3Q96MX0 182 aa16.4■□□□□ 0.22
VARS-224ENST00000479051 GINS4Q9BRT9 223 aa16.4■□□□□ 0.22
VARS-224ENST00000479051 IFI27L2Q9H2X8 130 aa16.4■□□□□ 0.22
VARS-224ENST00000479051 RDH8Q9NYR8 311 aa16.4■□□□□ 0.22
VARS-224ENST00000479051 COMMD3Q9UBI1 195 aa16.4■□□□□ 0.22
VARS-224ENST00000479051 SAA2-SAA4A0A096LPE2 208 aa16.39■□□□□ 0.21
VARS-224ENST00000479051 IGKV1-6A0A0C4DH72 117 aa16.39■□□□□ 0.21
VARS-224ENST00000479051 CTXN2P0C2S0 81 aa16.39■□□□□ 0.21
VARS-224ENST00000479051 SAA2P0DJI9 122 aaPredicted RBP16.39■□□□□ 0.21
VARS-224ENST00000479051 TMBIM6P55061 237 aa16.39■□□□□ 0.21
VARS-224ENST00000479051 HERPUD1Q15011 391 aa16.39■□□□□ 0.21
VARS-224ENST00000479051 TMEM69Q5SWH9 247 aa16.39■□□□□ 0.21
VARS-224ENST00000479051 OR2T10Q8NGZ9 312 aa16.39■□□□□ 0.21
VARS-224ENST00000479051 WFDC12Q8WWY7 111 aa16.39■□□□□ 0.21
VARS-224ENST00000479051 C11orf54Q9H0W9 315 aaPredicted RBP16.39■□□□□ 0.21
VARS-224ENST00000479051 AUNIPQ9H7T9 357 aa16.39■□□□□ 0.21
VARS-224ENST00000479051 ZNF221Q9UK13 617 aa16.39■□□□□ 0.21
VARS-224ENST00000479051 MOB4Q9Y3A3 225 aa16.39■□□□□ 0.21
VARS-224ENST00000479051 TRBV6-7A0A0A0MS04 114 aa16.38■□□□□ 0.21
VARS-224ENST00000479051 IGHV3-72A0A0B4J1Y9 119 aa16.38■□□□□ 0.21
VARS-224ENST00000479051 SMIM31A0A1B0GVY4 71 aa16.38■□□□□ 0.21
VARS-224ENST00000479051 APOA1P02647 267 aa16.38■□□□□ 0.21
VARS-224ENST00000479051 ZNF182P17025 639 aaPredicted RBP16.38■□□□□ 0.21
VARS-224ENST00000479051 SOX6P35712 828 aa16.38■□□□□ 0.21
VARS-224ENST00000479051 IGSF11Q5DX21 431 aa16.38■□□□□ 0.21
VARS-224ENST00000479051 ZNF833PQ6ZTB9 187 aa16.38■□□□□ 0.21
VARS-224ENST00000479051 ODF3L1Q8IXM7 274 aa16.38■□□□□ 0.21
VARS-224ENST00000479051 TOLLIPQ9H0E2 274 aa16.38■□□□□ 0.21
VARS-224ENST00000479051 PEX14O75381 377 aa16.37■□□□□ 0.21
VARS-224ENST00000479051 MOSP00540 346 aa16.37■□□□□ 0.21
VARS-224ENST00000479051 CBX5P45973 191 aa16.37■□□□□ 0.21
VARS-224ENST00000479051 OR3A3P47888 321 aa16.37■□□□□ 0.21
VARS-224ENST00000479051 PROK1P58294 105 aa16.37■□□□□ 0.21
VARS-224ENST00000479051 EBI3Q14213 229 aa16.37■□□□□ 0.21
VARS-224ENST00000479051 HNF4GQ14541 408 aa16.37■□□□□ 0.21
VARS-224ENST00000479051 Q8N2B8 174 aa16.37■□□□□ 0.21
VARS-224ENST00000479051 PARP12Q9H0J9 701 aaKnown RBP16.37■□□□□ 0.21
VARS-224ENST00000479051 ZNF702PQ9H963 129 aa16.37■□□□□ 0.21
VARS-224ENST00000479051 SSX5O60225 188 aa16.36■□□□□ 0.21
VARS-224ENST00000479051 GPR12P47775 334 aa16.36■□□□□ 0.21
VARS-224ENST00000479051 LSAMPQ13449 338 aa16.36■□□□□ 0.21
VARS-224ENST00000479051 CNIH2Q6PI25 160 aa16.36■□□□□ 0.21
VARS-224ENST00000479051 ABHD14BQ96IU4 210 aa16.36■□□□□ 0.21
VARS-224ENST00000479051 EAF1Q96JC9 268 aaPredicted RBP16.36■□□□□ 0.21
VARS-224ENST00000479051 AGMATQ9BSE5 352 aa16.36■□□□□ 0.21
VARS-224ENST00000479051 MRPL20Q9BYC9 149 aaKnown RBP16.36■□□□□ 0.21
VARS-224ENST00000479051 RBM7Q9Y580 266 aaKnown RBP16.36■□□□□ 0.21
VARS-224ENST00000479051 FGF16O43320 207 aa16.35■□□□□ 0.21
VARS-224ENST00000479051 ARPC4P59998 168 aa16.35■□□□□ 0.21
VARS-224ENST00000479051 BLCAPP62952 87 aa16.35■□□□□ 0.21
VARS-224ENST00000479051 ABCA11PQ4W5N1 156 aa16.35■□□□□ 0.21
VARS-224ENST00000479051 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.35■□□□□ 0.21
VARS-224ENST00000479051 OR8H1Q8NGG4 311 aa16.35■□□□□ 0.21
VARS-224ENST00000479051 NABP2Q9BQ15 211 aa16.35■□□□□ 0.21
VARS-224ENST00000479051 IFT46Q9NQC8 304 aa16.35■□□□□ 0.21
VARS-224ENST00000479051 ANXA10Q9UJ72 324 aa16.35■□□□□ 0.21
VARS-224ENST00000479051 SIGLEC9Q9Y336 463 aa16.35■□□□□ 0.21
VARS-224ENST00000479051 TENM1Q9UKZ4 2725 aa16.34■□□□□ 0.21
VARS-224ENST00000479051 IGKV1D-8A0A087WSZ0 117 aa16.34■□□□□ 0.21
VARS-224ENST00000479051 EIF4EP06730 217 aaKnown RBP16.34■□□□□ 0.21
VARS-224ENST00000479051 VDAC2P45880 294 aaPredicted RBP16.34■□□□□ 0.21
VARS-224ENST00000479051 TAS2R20P59543 309 aa16.34■□□□□ 0.21
VARS-224ENST00000479051 FBLN7Q53RD9 439 aa16.34■□□□□ 0.21
VARS-224ENST00000479051 RPL39P5Q59GN2 51 aa16.34■□□□□ 0.21
VARS-224ENST00000479051 BEST4Q8NFU0 473 aa16.34■□□□□ 0.21
VARS-224ENST00000479051 RNF150Q9ULK6 438 aa16.34■□□□□ 0.21
VARS-224ENST00000479051 NCBP2LA6PVI3 153 aaKnown RBP16.33■□□□□ 0.2
VARS-224ENST00000479051 FAM25AB3EWG3 89 aa16.33■□□□□ 0.2
VARS-224ENST00000479051 FAM25CB3EWG5 89 aa16.33■□□□□ 0.2
VARS-224ENST00000479051 FAM25GB3EWG6 89 aa16.33■□□□□ 0.2
VARS-224ENST00000479051 HPGDSO60760 199 aa16.33■□□□□ 0.2
VARS-224ENST00000479051 OR8U9P0C7N5 309 aa16.33■□□□□ 0.2
VARS-224ENST00000479051 SPCS2Q15005 226 aa16.33■□□□□ 0.2
VARS-224ENST00000479051 C9orf152Q5JTZ5 239 aa16.33■□□□□ 0.2
VARS-224ENST00000479051 HOGA1Q86XE5 327 aa16.33■□□□□ 0.2
VARS-224ENST00000479051 H1FOOQ8IZA3 346 aaPredicted RBP16.33■□□□□ 0.2
VARS-224ENST00000479051 OR8U1Q8NH10 309 aa16.33■□□□□ 0.2
VARS-224ENST00000479051 ZNF251Q9BRH9 671 aa16.33■□□□□ 0.2
VARS-224ENST00000479051 OR2D2Q9H210 308 aa16.33■□□□□ 0.2
VARS-224ENST00000479051 OR5H14A6NHG9 310 aa16.32■□□□□ 0.2
VARS-224ENST00000479051 ZNF736B4DX44 427 aaPredicted RBP16.32■□□□□ 0.2
VARS-224ENST00000479051 VSIG10L2P0DP72 767 aa16.32■□□□□ 0.2
VARS-224ENST00000479051 MC5RP33032 325 aa16.32■□□□□ 0.2
VARS-224ENST00000479051 PRSS3P35030 304 aa16.32■□□□□ 0.2
VARS-224ENST00000479051 Q8N6K4 173 aa16.32■□□□□ 0.2
VARS-224ENST00000479051 KLHDC1Q8N7A1 406 aa16.32■□□□□ 0.2
VARS-224ENST00000479051 C5orf56Q8N8D9 126 aa16.32■□□□□ 0.2
VARS-224ENST00000479051 DNHD1Q96M86 4753 aa16.32■□□□□ 0.2
VARS-224ENST00000479051 MRPS7Q9Y2R9 242 aaKnown RBP16.32■□□□□ 0.2
VARS-224ENST00000479051 CCDC160A6NGH7 325 aa16.31■□□□□ 0.2
VARS-224ENST00000479051 PTHLHP12272 177 aa16.31■□□□□ 0.2
VARS-224ENST00000479051 ELK1P19419 428 aa16.31■□□□□ 0.2
VARS-224ENST00000479051 GVQW1Q8N7I0 195 aa16.31■□□□□ 0.2
VARS-224ENST00000479051 SGMS2Q8NHU3 365 aa16.31■□□□□ 0.2
VARS-224ENST00000479051 ISOC1Q96CN7 298 aa16.31■□□□□ 0.2
VARS-224ENST00000479051 SERTAD4Q9NUC0 356 aa16.31■□□□□ 0.2
VARS-224ENST00000479051 CCDC59Q9P031 241 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms