RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 SECTM1Q8WVN6 248 aa7.05□□□□□ -1.28
VPS45-208ENST00000478999 DYRK2Q92630 601 aa7.05□□□□□ -1.28
VPS45-208ENST00000478999 LSM10Q969L4 123 aaKnown RBP7.05□□□□□ -1.28
VPS45-208ENST00000478999 TP53RKQ96S44 253 aa7.05□□□□□ -1.28
VPS45-208ENST00000478999 NRIP2Q9BQI9 281 aa7.05□□□□□ -1.28
VPS45-208ENST00000478999 ADAT1Q9BUB4 502 aaKnown RBP7.05□□□□□ -1.28
VPS45-208ENST00000478999 C1QTNF6Q9BXI9 259 aa7.05□□□□□ -1.28
VPS45-208ENST00000478999 BCL2L14Q9BZR8 327 aa7.05□□□□□ -1.28
VPS45-208ENST00000478999 C11orf1Q9H5F2 150 aa7.05□□□□□ -1.28
VPS45-208ENST00000478999 SEBOXQ9HB31 216 aaPredicted RBP7.05□□□□□ -1.28
VPS45-208ENST00000478999 OR2S2Q9NQN1 319 aa7.05□□□□□ -1.28
VPS45-208ENST00000478999 PRR13Q9NZ81 148 aa7.05□□□□□ -1.28
VPS45-208ENST00000478999 ZNF581Q9P0T4 197 aa7.05□□□□□ -1.28
VPS45-208ENST00000478999 TRAV24A0A0B4J272 114 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 A0A1B0GW64 132 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 BTBD17A6NE02 478 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 HSPA12AO43301 675 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 FBXO24O75426 580 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 SCGB1D2O95969 90 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 IGKV3-15P01624 115 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 DANCRP0C864 163 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 CCL2P13500 99 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 IGHV1-2P23083 117 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 CA6P23280 308 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 F2RP25116 425 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 PAX6P26367 422 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 CDKN1AP38936 164 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 DVL1P1P54792 670 aaPredicted RBP7.04□□□□□ -1.28
VPS45-208ENST00000478999 UCP2P55851 309 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 PRSS12P56730 875 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 VAMP2P63027 116 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 DEFA5Q01523 94 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 PAX5Q02548 391 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 HERPUD1Q15011 391 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 MST1LQ2TV78 715 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 SP6Q3SY56 376 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 IGSF11Q5DX21 431 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 NCMAPQ5T1S8 102 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 OR2T2Q6IF00 324 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 Q6P435 159 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 TRAT1Q6PIZ9 186 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 BTNL8Q6UX41 500 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 TMEM108Q6UXF1 575 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 DPPA3Q6W0C5 159 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 ZNF497Q6ZNH5 498 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 C22orf34Q6ZV56 151 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 FOXRED2Q8IWF2 684 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 SELENOHQ8IZQ5 122 aaKnown RBP7.04□□□□□ -1.28
VPS45-208ENST00000478999 CLRN3Q8NCR9 226 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 GNPNAT1Q96EK6 184 aaPredicted RBP7.04□□□□□ -1.28
VPS45-208ENST00000478999 RAB40CQ96S21 281 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 TOLLIPQ9H0E2 274 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 TLNRD1Q9H1K6 362 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 HIPK2Q9H2X6 1198 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 HES4Q9HCC6 221 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 LYRM2Q9NU23 88 aaPredicted RBP7.04□□□□□ -1.28
VPS45-208ENST00000478999 MBNL3Q9NUK0 354 aaKnown RBP7.04□□□□□ -1.28
VPS45-208ENST00000478999 LIN7CQ9NUP9 197 aaKnown RBP7.04□□□□□ -1.28
VPS45-208ENST00000478999 UQCC1Q9NVA1 299 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 RCL1Q9Y2P8 373 aaKnown RBP7.04□□□□□ -1.28
VPS45-208ENST00000478999 WIPI2Q9Y4P8 454 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 KPTNQ9Y664 436 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 SVEP1Q4LDE5 3571 aa7.04□□□□□ -1.28
VPS45-208ENST00000478999 PLCE1Q9P212 2302 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 A0A1B0GWJ7 208 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 TMEM30CPA0ZSE6 113 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 FAM90A26D6RGX4 464 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 F8W036 122 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.03□□□□□ -1.28
VPS45-208ENST00000478999 IFNL4K9M1U5 179 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 M0R1B8 84 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 WRBO00258 174 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 KCNAB3O43448 404 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 DFFBO76075 338 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 SCAF4O95104 1147 aaKnown RBP7.03□□□□□ -1.28
VPS45-208ENST00000478999 NXPH2O95156 264 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 CD5P06127 495 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 SERPINE2P07093 398 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 SCTP09683 121 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 ZNF44P15621 663 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 KITLGP21583 273 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 LMO1P25800 156 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 LOXP28300 417 aaPredicted RBP7.03□□□□□ -1.28
VPS45-208ENST00000478999 LPAR6P43657 344 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 ZNF83P51522 516 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 IDH3GP51553 393 aaPredicted RBP7.03□□□□□ -1.28
VPS45-208ENST00000478999 EWSR1Q01844 656 aaKnown RBP eCLIP7.03□□□□□ -1.28
VPS45-208ENST00000478999 PEA15Q15121 130 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 ZNF672Q499Z4 452 aaPredicted RBP7.03□□□□□ -1.28
VPS45-208ENST00000478999 BRICD5Q6PL45 260 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 ZNF818PQ6ZRF7 136 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 SCCPDHQ8NBX0 429 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 DMBX1Q8NFW5 382 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 OR10V1Q8NGI7 309 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 OR11L1Q8NGX0 322 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 CYYR1Q96J86 154 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 PBDC1Q9BVG4 233 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 C19orf24Q9BVV8 132 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 TREM1Q9NP99 234 aa7.03□□□□□ -1.28
VPS45-208ENST00000478999 CISD1Q9NZ45 108 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms