RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 BLNKQ8WV28 456 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 OR10C1Q96KK4 312 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 DIRC2Q96SL1 478 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 CHRDL1Q9BU40 450 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 IL19Q9UHD0 177 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 H0Y980 276 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 K7N7A8 449 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 CD74P04233 296 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 RUNX1Q01196 453 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 OR10A7Q8NGE5 316 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 KLHDC3Q9BQ90 382 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 SFXN3Q9BWM7 321 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 NOTCH2Q04721 2471 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 SLC25A5P05141 298 aaKnown RBP12.19□□□□□ -0.46
NPHP4-208ENST00000478423 UBE2L3P68036 154 aaKnown RBP12.19□□□□□ -0.46
NPHP4-208ENST00000478423 PAX5Q02548 391 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 OR5I1Q13606 314 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 OR4F17Q8NGA8 305 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 OR1L8Q8NGR8 309 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 TMEM37Q8WXS4 190 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 NUDT16L1Q9BRJ7 211 aaKnown RBP12.19□□□□□ -0.46
NPHP4-208ENST00000478423 IGLV3-32A0A0A0MS00 114 aa12.18□□□□□ -0.46
NPHP4-208ENST00000478423 XKRY2A2RUG3 117 aa12.18□□□□□ -0.46
NPHP4-208ENST00000478423 CD59P13987 128 aa12.18□□□□□ -0.46
NPHP4-208ENST00000478423 GPR6P46095 362 aaPredicted RBP12.18□□□□□ -0.46
NPHP4-208ENST00000478423 LYPD8Q6UX82 237 aa12.18□□□□□ -0.46
NPHP4-208ENST00000478423 CALHM1Q8IU99 346 aa12.18□□□□□ -0.46
NPHP4-208ENST00000478423 BCL2L2Q92843 193 aaPredicted RBP12.18□□□□□ -0.46
NPHP4-208ENST00000478423 PLXNA3P51805 1871 aa12.18□□□□□ -0.46
NPHP4-208ENST00000478423 LINC00862A6NCI5 91 aa12.18□□□□□ -0.46
NPHP4-208ENST00000478423 TMEM171Q8WVE6 324 aa12.18□□□□□ -0.46
NPHP4-208ENST00000478423 ZNF714Q96N38 554 aa12.18□□□□□ -0.46
NPHP4-208ENST00000478423 NAT2P11245 290 aa12.18□□□□□ -0.46
NPHP4-208ENST00000478423 LYZP61626 148 aa12.18□□□□□ -0.46
NPHP4-208ENST00000478423 EFNB1P98172 346 aa12.18□□□□□ -0.46
NPHP4-208ENST00000478423 MMDQ15546 238 aa12.18□□□□□ -0.46
NPHP4-208ENST00000478423 TMUB1Q9BVT8 246 aa12.18□□□□□ -0.46
NPHP4-208ENST00000478423 J3QW42 95 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 PGLYRP1O75594 196 aaPredicted RBP12.17□□□□□ -0.46
NPHP4-208ENST00000478423 HPRT1P00492 218 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 CFDP00746 253 aaPredicted RBP12.17□□□□□ -0.46
NPHP4-208ENST00000478423 NMBP08949 121 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 B2MP61769 119 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 NAAAQ02083 359 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 SIGIRRQ6IA17 410 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 C1RLQ9NZP8 487 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 ZDHHC8Q9ULC8 765 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 M0QZ24 198 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 EFNA2O43921 213 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 CECR9P0C854 216 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 GLIPR1P48060 266 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 FAM27E3Q08E93 113 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 ZNF66Q6ZN08 573 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 RNF24Q9Y225 148 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 SPINK4O60575 86 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 ZNF660Q6AZW8 331 aaPredicted RBP12.17□□□□□ -0.46
NPHP4-208ENST00000478423 ASPHD2Q6ICH7 369 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 FGFRL1Q8N441 504 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 OR1L4Q8NGR5 311 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 TRAF4Q9BUZ4 470 aaPredicted RBP12.17□□□□□ -0.46
NPHP4-208ENST00000478423 SLC2A8Q9NY64 477 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 SERTM2A0A1B0GWG4 89 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 ARG1P05089 322 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 DAOP14920 347 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 OR4P4Q8NGL7 312 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 OR5P3Q8WZ94 311 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 ABHD17AQ96GS6 310 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 PCGF1Q9BSM1 259 aa12.17□□□□□ -0.46
NPHP4-208ENST00000478423 C1QL1O75973 258 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 GNG4P50150 75 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 GAS1P54826 345 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 ERVS71-1P61550 626 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 IGHV3-72A0A0B4J1Y9 119 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 F2RL2O00254 374 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 DEDDO75618 318 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 NEURL1O76050 574 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 CYB5R3P00387 301 aaPredicted RBP12.16□□□□□ -0.46
NPHP4-208ENST00000478423 LHX2P50458 406 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 BSXQ3C1V8 233 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 AWAT1Q58HT5 328 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 ISOC2Q96AB3 205 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 CALYQ9NYX4 217 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 GLRXP35754 106 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 PTGDSP41222 190 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 PSG5Q15238 335 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 TIMM23BQ5SRD1 257 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 REPIN1Q9BWE0 567 aaKnown RBP12.16□□□□□ -0.46
NPHP4-208ENST00000478423 PARP11Q9NR21 331 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 TECRQ9NZ01 308 aaKnown RBP12.16□□□□□ -0.46
NPHP4-208ENST00000478423 CLCF1Q9UBD9 225 aa12.16□□□□□ -0.46
NPHP4-208ENST00000478423 C11orf94C9JXX5 98 aa12.15□□□□□ -0.46
NPHP4-208ENST00000478423 WNT9BO14905 357 aa12.15□□□□□ -0.46
NPHP4-208ENST00000478423 GNG7O60262 68 aa12.15□□□□□ -0.46
NPHP4-208ENST00000478423 CLDN18P56856 261 aa12.15□□□□□ -0.46
NPHP4-208ENST00000478423 IZUMO4Q1ZYL8 232 aa12.15□□□□□ -0.46
NPHP4-208ENST00000478423 NRN1LQ496H8 165 aa12.15□□□□□ -0.46
NPHP4-208ENST00000478423 SPNS3Q6ZMD2 512 aa12.15□□□□□ -0.46
NPHP4-208ENST00000478423 SLC35E3Q7Z769 313 aa12.15□□□□□ -0.46
NPHP4-208ENST00000478423 OR1B1Q8NGR6 318 aa12.15□□□□□ -0.46
NPHP4-208ENST00000478423 MRPS18CQ9Y3D5 142 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms