RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 FKBP14Q9NWM8 211 aa11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 ZNF256Q9Y2P7 627 aaPredicted RBP11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 IGHV7-81A0A0B4J1V7 117 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 H7C2Y5 167 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 ITGB1BP1O14713 200 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 SLC22A1O15245 554 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 NDUFA3O95167 84 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 LY86O95711 162 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 NAPSAO96009 420 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 IGLV1-40P01703 118 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 GSTP1P09211 210 aaKnown RBP11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 SRMP19623 302 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 ZBTB25P24278 435 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 PPIFP30405 207 aaKnown RBP11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 MRPS15P82914 257 aaKnown RBP11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 MED22Q15528 200 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 FAM131AQ6UXB0 335 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 C6orf201Q7Z4U5 140 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 CEACAM19Q7Z692 300 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 ZNF429Q86V71 674 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 ODF3L1Q8IXM7 274 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 ZNF491Q8N8L2 437 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 ABHD5Q8WTS1 349 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 RNF5Q99942 180 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 FAAP24Q9BTP7 215 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 IFI27L2Q9H2X8 130 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 C12orf4Q9NQ89 552 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 FOXA2Q9Y261 457 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 WASHC3Q9Y3C0 194 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 WSB1Q9Y6I7 421 aa11.27□□□□□ -0.61
SMARCE1-209ENST00000478349 PTGES3LE9PB15 166 aa11.26□□□□□ -0.61
SMARCE1-209ENST00000478349 ARPC1BO15143 372 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-209ENST00000478349 UCHL1P09936 223 aa11.26□□□□□ -0.61
SMARCE1-209ENST00000478349 ARSBP15848 533 aa11.26□□□□□ -0.61
SMARCE1-209ENST00000478349 OR3A3P47888 321 aa11.26□□□□□ -0.61
SMARCE1-209ENST00000478349 RAB9AP51151 201 aa11.26□□□□□ -0.61
SMARCE1-209ENST00000478349 ECSCRQ19T08 205 aa11.26□□□□□ -0.61
SMARCE1-209ENST00000478349 LRRTM1Q86UE6 522 aa11.26□□□□□ -0.61
SMARCE1-209ENST00000478349 TPRKBQ9Y3C4 175 aa11.26□□□□□ -0.61
SMARCE1-209ENST00000478349 U3KQK5 164 aa11.26□□□□□ -0.61
SMARCE1-209ENST00000478349 TRBV6-6A0A0A6YYG2 114 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 A0A1W2PN81 502 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 TMEM14DPA8MWL7 114 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 G3V318 75 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 I3L521 148 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 RRHO14718 337 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 ST8SIA5O15466 376 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 SPDEFO95238 335 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 APOA2P02652 100 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 CHRNA7P36544 502 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 PSMD7P51665 324 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 CRIP2P52943 208 aaPredicted RBP11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 HLA-DRB3P79483 266 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 OR10K2Q6IF99 312 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 LAIR2Q6ISS4 152 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 ZNF880Q6PDB4 577 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 MINDY2Q8NBR6 621 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 PRR25Q96S07 402 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 TSNAXQ99598 290 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 ISYNA1Q9NPH2 558 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 ZNF221Q9UK13 617 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 HSF4Q9ULV5 492 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 DNAH3Q8TD57 4116 aa11.25□□□□□ -0.61
SMARCE1-209ENST00000478349 LINC01619G3V211 115 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 SLC17A2O00624 439 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 OVOL1O14753 267 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 SAP30O75446 220 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 CPEP16870 476 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 SERPINB10P48595 397 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 CBX3Q13185 183 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 UNC119Q13432 240 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 INSL4Q14641 139 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 RAB11BQ15907 218 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 OR56B1Q8NGI3 324 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 FLYWCH2Q96CP2 140 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 NICN1Q9BSH3 213 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 SLA2Q9H6Q3 261 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 GNB4Q9HAV0 340 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 LSM4Q9Y4Z0 139 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 SMAD5-AS1Q9Y6J3 95 aa11.24□□□□□ -0.61
SMARCE1-209ENST00000478349 H0YJW9 148 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 LGALS1P09382 135 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 HSMCR30P0CW71 290 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 CNTFRP26992 372 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 CEACAM6P40199 344 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 CX3CL1P78423 397 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 ACTBL2Q562R1 376 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 RPL39P5Q59GN2 51 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 LIPKQ5VXJ0 399 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 CD200R1LQ6Q8B3 271 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 PDPNQ86YL7 162 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 OR5AN1Q8NGI8 311 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 OR6Q1Q8NGQ2 317 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 OR5B12Q96R08 314 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 CENPOQ9BU64 300 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 KLK15Q9H2R5 256 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 FBXL15Q9H469 300 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 AK3Q9UIJ7 227 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 SCOCQ9UIL1 159 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 LSM2Q9Y333 95 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms