RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 E7EQL1 145 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 PPIAL4DF5H284 164 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 TMEM178BH3BS89 294 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 WRBO00258 174 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 GPR37O15354 613 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 RBFOX2O43251 390 aaKnown RBP eCLIP6.61□□□□□ -1.35
VMA21-203ENST00000477649 PITX3O75364 302 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 MED6O75586 246 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 SPDEFO95238 335 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 GOSR1O95249 250 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 IGLV2-14P01704 120 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 PPIAL4FP0DN26 164 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 CGB3P0DN86 165 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 CGB7P0DN87 165 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 PPOXP50336 477 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 VAMP2P63027 116 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 MRPS11P82912 194 aaKnown RBP6.61□□□□□ -1.35
VMA21-203ENST00000477649 EDDM3AQ14507 147 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 ZNF266Q14584 549 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 ADAM5Q6NVV9 412 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 DMRTC2Q8IXT2 367 aaPredicted RBP6.61□□□□□ -1.35
VMA21-203ENST00000477649 EIF4E3Q8N5X7 224 aaKnown RBP6.61□□□□□ -1.35
VMA21-203ENST00000477649 BOLLQ8N9W6 283 aaKnown RBP6.61□□□□□ -1.35
VMA21-203ENST00000477649 UBAC2Q8NBM4 344 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 GALNT11Q8NCW6 608 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 OR13A1Q8NGR1 328 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 OR51H1Q8NH63 302 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 RNASE11Q8TAA1 199 aaKnown RBP6.61□□□□□ -1.35
VMA21-203ENST00000477649 LHFPL5Q8TAF8 219 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 RNF141Q8WVD5 230 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 GAFA1Q96PS6 74 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 TMEM204Q9BSN7 226 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 OR2D2Q9H210 308 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 GAL3ST2Q9H3Q3 398 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 TMEM106BQ9NUM4 274 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 CALYQ9NYX4 217 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 GNG12Q9UBI6 72 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 KAAG1Q9UBP8 84 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 CLN8Q9UBY8 286 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 LSM5Q9Y4Y9 91 aaKnown RBP6.61□□□□□ -1.35
VMA21-203ENST00000477649 PPIAL4AQ9Y536 164 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 MMP24Q9Y5R2 645 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 LINC00312Q9Y6C7 94 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 IGF2RP11717 2491 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 FAM208BQ5VWN6 2430 aa6.61□□□□□ -1.35
VMA21-203ENST00000477649 SVILO95425 2214 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 FAM90A27PA6NNH2 459 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 TOR1AO14656 332 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 ADAM20O43506 726 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 SCGB1D2O95969 90 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 NMBP08949 121 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 CD80P33681 288 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 RAB5CP51148 216 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 AKR1C2P52895 323 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 EDDM3BP56851 147 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 RPL23AP62750 156 aaKnown RBP6.6□□□□□ -1.35
VMA21-203ENST00000477649 ADORA2A-AS1P86434 159 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 TAGLNQ01995 201 aaKnown RBP6.6□□□□□ -1.35
VMA21-203ENST00000477649 EIF4EBP1Q13541 118 aaPredicted RBP6.6□□□□□ -1.35
VMA21-203ENST00000477649 SWI5Q1ZZU3 235 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 ZNF672Q499Z4 452 aaPredicted RBP6.6□□□□□ -1.35
VMA21-203ENST00000477649 MORN2Q502X0 79 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 MIDNQ504T8 468 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 C4orf17Q53FE4 359 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 LRRC10Q5BKY1 277 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 ALKAL2Q6UX46 152 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 OR2C3Q8N628 320 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 OR52L2PQ8NGH6 319 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 SAT2Q96F10 170 aaPredicted RBP6.6□□□□□ -1.35
VMA21-203ENST00000477649 AIFM2Q9BRQ8 373 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 GFOD1Q9NXC2 390 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 CISD1Q9NZ45 108 aaKnown RBP6.6□□□□□ -1.35
VMA21-203ENST00000477649 PRELID3BQ9Y3B1 194 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 WSB1Q9Y6I7 421 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 ITPR1Q14643 2758 aa6.6□□□□□ -1.35
VMA21-203ENST00000477649 TRBV23-1A0A0A0MS06 115 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 TRAV39A0A0B4J263 110 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 IGHV1-69-2A0A0G2JMI3 117 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 A0A1W2PPH5 198 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 ANKRD34BA5PLL1 514 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 RAB29O14966 203 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 TNFSF12O43508 249 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 NDUFB3O43676 98 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 DFFBO76075 338 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 CLDN14O95500 239 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 CLDN1O95832 211 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 CYB5R3P00387 301 aaPredicted RBP6.59□□□□□ -1.35
VMA21-203ENST00000477649 SSTR5P35346 364 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 GPR12P47775 334 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 TMEM33P57088 247 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 LOXL3P58215 753 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 CCL8P80075 99 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 HFEQ30201 348 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 HSD17B13Q7Z5P4 300 aaPredicted RBP6.59□□□□□ -1.35
VMA21-203ENST00000477649 COMMD7Q86VX2 200 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 MUC15Q8N387 334 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 C8orf31Q8N9H6 132 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 ZNRF1Q8ND25 227 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 DMBX1Q8NFW5 382 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 NEU4Q8WWR8 484 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms