RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 INPP1P49441 399 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 LOXL3P58215 753 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 PRR31Q5SQ13 230 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 TRIQKQ629K1 86 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 ZNF880Q6PDB4 577 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 HOGA1Q86XE5 327 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 OR1L1Q8NH94 360 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 SGMS2Q8NHU3 365 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 SETD6Q8TBK2 473 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 BORCS5Q969J3 196 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 ARL11Q969Q4 196 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 ST6GALNAC5Q9BVH7 336 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 MMP28Q9H239 520 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 ABCB10Q9NRK6 738 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 ZNF107Q9UII5 783 aaPredicted RBP14.13□□□□□ -0.15
PTPN7-209ENST00000477554 RBMX2Q9Y388 322 aaKnown RBP14.13□□□□□ -0.15
PTPN7-209ENST00000477554 MEGF8Q7Z7M0 2845 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 TOR1AO14656 332 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 CSF1P09603 554 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 DYNLT3P51808 116 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 AP3S2P59780 193 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 BAK1Q16611 211 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 C6orf183Q5T699 404 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 TRAT1Q6PIZ9 186 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 Q6ZS49 121 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 PRR18Q8N4B5 295 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 GVQW1Q8N7I0 195 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 OR9G1Q8NH87 305 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 ZNF596Q8TC21 504 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 Q9N2K0 584 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 SERTAD4Q9NUC0 356 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 MBNL3Q9NUK0 354 aaKnown RBP14.12□□□□□ -0.15
PTPN7-209ENST00000477554 KCNIP1Q9NZI2 227 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 ZNF230Q9UIE0 474 aaPredicted RBP14.12□□□□□ -0.15
PTPN7-209ENST00000477554 ANAPC10Q9UM13 185 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 WNK1Q9H4A3 2382 aa14.12□□□□□ -0.15
PTPN7-209ENST00000477554 LEUTXA8MZ59 168 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 UPK1BO75841 260 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 IL7P13232 177 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 NAT1P18440 290 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 GZMHP20718 246 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 KIR2DS4P43632 304 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 REG1BP48304 166 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 GNMTQ14749 295 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 KIR2DS1Q14954 304 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 ZNF554Q86TJ5 538 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 TOMM5Q8N4H5 51 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 BEST4Q8NFU0 473 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 OR10V1Q8NGI7 309 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 TRIM63Q969Q1 353 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 RAB9BQ9NP90 201 aa14.11□□□□□ -0.15
PTPN7-209ENST00000477554 A0A1W2PPI3 338 aa14.1□□□□□ -0.15
PTPN7-209ENST00000477554 LANCL1O43813 399 aa14.1□□□□□ -0.15
PTPN7-209ENST00000477554 TSPAN15O95858 294 aa14.1□□□□□ -0.15
PTPN7-209ENST00000477554 AMY1AP04745 511 aa14.1□□□□□ -0.15
PTPN7-209ENST00000477554 AMY2AP04746 511 aa14.1□□□□□ -0.15
PTPN7-209ENST00000477554 ZNF134P52741 427 aa14.1□□□□□ -0.15
PTPN7-209ENST00000477554 TAS2R19P59542 299 aa14.1□□□□□ -0.15
PTPN7-209ENST00000477554 LYG1Q8N1E2 194 aa14.1□□□□□ -0.15
PTPN7-209ENST00000477554 KLHDC1Q8N7A1 406 aa14.1□□□□□ -0.15
PTPN7-209ENST00000477554 TMEM229BQ8NBD8 167 aa14.1□□□□□ -0.15
PTPN7-209ENST00000477554 OR4C13Q8NGP0 309 aa14.1□□□□□ -0.15
PTPN7-209ENST00000477554 DEDD2Q8WXF8 326 aa14.1□□□□□ -0.15
PTPN7-209ENST00000477554 TRDCB7Z8K6 153 aa14.09□□□□□ -0.15
PTPN7-209ENST00000477554 SDCBPO00560 298 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-209ENST00000477554 TIMM23O14925 209 aa14.09□□□□□ -0.15
PTPN7-209ENST00000477554 HBZP02008 142 aa14.09□□□□□ -0.15
PTPN7-209ENST00000477554 VSIG10L2P0DP72 767 aa14.09□□□□□ -0.15
PTPN7-209ENST00000477554 TBPP20226 339 aa14.09□□□□□ -0.15
PTPN7-209ENST00000477554 PRRX1P54821 245 aa14.09□□□□□ -0.15
PTPN7-209ENST00000477554 ZNF57Q68EA5 555 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-209ENST00000477554 DRAM1Q8N682 238 aa14.09□□□□□ -0.15
PTPN7-209ENST00000477554 OR56B4Q8NH76 319 aa14.09□□□□□ -0.15
PTPN7-209ENST00000477554 CFHR4Q92496 578 aa14.09□□□□□ -0.15
PTPN7-209ENST00000477554 NPFFR1Q9GZQ6 430 aa14.09□□□□□ -0.15
PTPN7-209ENST00000477554 PALMDQ9NP74 551 aa14.09□□□□□ -0.15
PTPN7-209ENST00000477554 GFOD1Q9NXC2 390 aa14.09□□□□□ -0.15
PTPN7-209ENST00000477554 ANXA10Q9UJ72 324 aa14.09□□□□□ -0.15
PTPN7-209ENST00000477554 IGHV3-72A0A0B4J1Y9 119 aa14.08□□□□□ -0.15
PTPN7-209ENST00000477554 ANKRD20A5PA0PJZ0 165 aa14.08□□□□□ -0.15
PTPN7-209ENST00000477554 ZNF736B4DX44 427 aaPredicted RBP14.08□□□□□ -0.15
PTPN7-209ENST00000477554 TAS2R46P59540 309 aa14.08□□□□□ -0.15
PTPN7-209ENST00000477554 HLA-DRB3P79483 266 aa14.08□□□□□ -0.15
PTPN7-209ENST00000477554 ACTBL2Q562R1 376 aa14.08□□□□□ -0.15
PTPN7-209ENST00000477554 Q8N2B8 174 aa14.08□□□□□ -0.15
PTPN7-209ENST00000477554 ZNF439Q8NDP4 499 aa14.08□□□□□ -0.15
PTPN7-209ENST00000477554 OR5AP2Q8NGF4 316 aa14.08□□□□□ -0.15
PTPN7-209ENST00000477554 MAFIPQ8WZ33 124 aa14.08□□□□□ -0.15
PTPN7-209ENST00000477554 SNAPC3Q92966 411 aa14.08□□□□□ -0.15
PTPN7-209ENST00000477554 TOMM40LQ969M1 308 aa14.08□□□□□ -0.15
PTPN7-209ENST00000477554 TAF9BQ9HBM6 251 aa14.08□□□□□ -0.15
PTPN7-209ENST00000477554 SPINT2O43291 252 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 FCER2P06734 321 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 SNRNP70P08621 437 aaKnown RBP14.07□□□□□ -0.16
PTPN7-209ENST00000477554 AKAIN1P0CW23 69 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 FAUP35544 74 aaKnown RBP14.07□□□□□ -0.16
PTPN7-209ENST00000477554 ARPC4P59998 168 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 DCTN2Q13561 401 aaKnown RBP14.07□□□□□ -0.16
PTPN7-209ENST00000477554 DYRK1AQ13627 763 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 HMGN3Q15651 99 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms