RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 JPT1Q9UK76 154 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 LOC100130705A0A1B0GUX0 176 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 C15orf65H3BRN8 121 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 OVOL1O14753 267 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 IL6RP08887 468 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-214ENST00000477152 MAPK3P27361 379 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-214ENST00000477152 PSMB8P28062 276 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 LUMP51884 338 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-214ENST00000477152 DIAPH2-AS1Q14236 149 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 Q499Y3 187 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 FAM71F2Q6NXP2 309 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 MZT2AQ6P582 158 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 CBR4Q8N4T8 237 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 JAGN1Q8N5M9 183 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 NKAIN3Q8N8D7 197 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 OR52I1Q8NGK6 324 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 ABHD5Q8WTS1 349 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 PYDC1Q8WXC3 89 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 ST6GALNAC6Q969X2 333 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 SMIM19Q96E16 107 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 PRR25Q96S07 402 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 ZNF184Q99676 751 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-214ENST00000477152 ELOVL1Q9BW60 279 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 OR2S2Q9NQN1 319 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 BABAM2Q9NXR7 383 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 IGHV3-43A0A0B4J1X8 118 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 TRAV41A0A0B4J266 112 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 NBR2O15453 112 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 GPX5O75715 221 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 HLA-DRB1P01911 266 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 IGHV3-43DP0DP04 118 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 FUT3P21217 361 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 MC5RP33032 325 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 HTD2P86397 168 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 PLGLAQ15195 96 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 LY6G6FQ5SQ64 297 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 AWAT2Q6E213 333 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 RAB12Q6IQ22 244 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 C18orf65Q6ZTR6 163 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 FAM71E2Q8N5Q1 922 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 SETD9Q8NE22 299 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 GALMQ96C23 342 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 DUX3Q96PT4 197 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 OR4C12Q96R67 309 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 ABHD14AQ9BUJ0 271 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 PIPOXQ9P0Z9 390 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 PEX16Q9Y5Y5 336 aa5.66□□□□□ -1.5
BRCA1-214ENST00000477152 TRAV39A0A0B4J263 110 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 C12orf77C9JDV5 145 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 OGG1O15527 345 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 YPEL1O60688 119 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 SAP30O75446 220 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 RBBP9O75884 186 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 HBZP02008 142 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 OR8U9P0C7N5 309 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 UBBP0CG47 229 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 GABRB1P18505 474 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 CAPGP40121 348 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 TIRAPP58753 221 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 PITPNAQ00169 270 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 GABPB1Q06547 395 aaPredicted RBP5.65□□□□□ -1.51
BRCA1-214ENST00000477152 DEFB136Q30KP8 78 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 ZNF660Q6AZW8 331 aaPredicted RBP5.65□□□□□ -1.51
BRCA1-214ENST00000477152 IGFL4Q6B9Z1 124 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 GLIPR1L1Q6UWM5 242 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 ZNF491Q8N8L2 437 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 TMEM104Q8NE00 496 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 OR2AK2Q8NG84 335 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 OR4K15Q8NH41 348 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 MUC7Q8TAX7 377 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 NEDD4LQ96PU5 975 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 YPEL2Q96QA6 119 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 RNF5Q99942 180 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 AMBNQ9NP70 447 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 C8orf4Q9NR00 106 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 PARP11Q9NR21 331 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 PLSCR3Q9NRY6 295 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 RCC2Q9P258 522 aaKnown RBP5.65□□□□□ -1.51
BRCA1-214ENST00000477152 MGAT4AQ9UM21 535 aa5.65□□□□□ -1.51
BRCA1-214ENST00000477152 LINC01548A6NM66 108 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 E9PI62 339 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 LINC01619G3V211 115 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 CRTAPO75718 401 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-214ENST00000477152 LYL1P12980 280 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 MYF6P23409 242 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 RAB9AP51151 201 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 ACTBP60709 375 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 CFHR3Q02985 330 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 MORN2Q502X0 79 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 CT45A1Q5HYN5 189 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 C6orf141Q5SZD1 244 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 TTC23Q5W5X9 447 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 SGPP2Q8IWX5 399 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 OR10V1Q8NGI7 309 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 CT45A3Q8NHU0 189 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 TMEM80Q96HE8 168 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 ASCL2Q99929 193 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 AIFM2Q9BRQ8 373 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 UQCC2Q9BRT2 126 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 SELENOIQ9C0D9 397 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms