RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 FCGR1AP12314 374 aa9.1□□□□□ -0.95
HDAC6-219ENST00000476625 MGMTP16455 207 aa9.1□□□□□ -0.95
HDAC6-219ENST00000476625 RPS11P62280 158 aaKnown RBP eCLIP9.1□□□□□ -0.95
HDAC6-219ENST00000476625 ZNF660Q6AZW8 331 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-219ENST00000476625 DMKNQ6E0U4 476 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-219ENST00000476625 AWAT2Q6E213 333 aa9.1□□□□□ -0.95
HDAC6-219ENST00000476625 OR10K2Q6IF99 312 aa9.1□□□□□ -0.95
HDAC6-219ENST00000476625 CBR4Q8N4T8 237 aa9.1□□□□□ -0.95
HDAC6-219ENST00000476625 IL1F10Q8WWZ1 152 aa9.1□□□□□ -0.95
HDAC6-219ENST00000476625 FLYWCH2Q96CP2 140 aaKnown RBP9.1□□□□□ -0.95
HDAC6-219ENST00000476625 HIPK2Q9H2X6 1198 aa9.1□□□□□ -0.95
HDAC6-219ENST00000476625 ZNF355PQ9NSJ1 428 aa9.1□□□□□ -0.95
HDAC6-219ENST00000476625 METTL1Q9UBP6 276 aaKnown RBP9.1□□□□□ -0.95
HDAC6-219ENST00000476625 NKX1-2Q9UD57 310 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-219ENST00000476625 CLEC2DQ9UHP7 191 aa9.1□□□□□ -0.95
HDAC6-219ENST00000476625 JPT1Q9UK76 154 aa9.1□□□□□ -0.95
HDAC6-219ENST00000476625 TRBV5-5A0A0J9YX44 114 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 H0YJW9 148 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 H3BNX3 289 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 H7C2Y5 167 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 RGS11O94810 467 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 FADS2O95864 444 aaKnown RBP9.09□□□□□ -0.95
HDAC6-219ENST00000476625 CSN3P07498 182 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 PJVKQ0ZLH3 352 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 PSG5Q15238 335 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 HMGN3Q15651 99 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 C6orf141Q5SZD1 244 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 RPL22L1Q6P5R6 122 aaKnown RBP9.09□□□□□ -0.95
HDAC6-219ENST00000476625 CD200R1LQ6Q8B3 271 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 RHOXF1Q8NHV9 184 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 MRPL48Q96GC5 212 aaKnown RBP9.09□□□□□ -0.95
HDAC6-219ENST00000476625 Q96M66 194 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 OR14A2Q96R54 314 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 ELOVL1Q9BW60 279 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 TUBA4BQ9H853 241 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 OR1A1Q9P1Q5 309 aa9.09□□□□□ -0.95
HDAC6-219ENST00000476625 RBMY1BA6NDE4 496 aaKnown RBP9.08□□□□□ -0.96
HDAC6-219ENST00000476625 RBMY1EA6NEQ0 496 aaKnown RBP9.08□□□□□ -0.96
HDAC6-219ENST00000476625 OGG1O15527 345 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 YPEL1O60688 119 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 PROP1O75360 226 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 WBP4O75554 376 aaKnown RBP9.08□□□□□ -0.96
HDAC6-219ENST00000476625 IGKV1-16P04430 117 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 CD7P09564 240 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 RBMY1DP0C7P1 496 aaKnown RBP9.08□□□□□ -0.96
HDAC6-219ENST00000476625 ALDH3A2P51648 485 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 RAB40BQ12829 278 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 KLF5Q13887 457 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-219ENST00000476625 C6orf201Q7Z4U5 140 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 DEFB125Q8N687 156 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 OR2AK2Q8NG84 335 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 OR9G4Q8NGQ1 327 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 GHSRQ92847 366 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 YPEL2Q96QA6 119 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 SLC29A1Q99808 456 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 NICN1Q9BSH3 213 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 HDHD3Q9BSH5 251 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-219ENST00000476625 FAAP24Q9BTP7 215 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 PAK1IP1Q9NWT1 392 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-219ENST00000476625 KCNIP1Q9NZI2 227 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 RNF150Q9ULK6 438 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 ORC6Q9Y5N6 252 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 TNCP24821 2201 aa9.08□□□□□ -0.96
HDAC6-219ENST00000476625 ZNF780AO75290 641 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-219ENST00000476625 PDCD6O75340 191 aa9.07□□□□□ -0.96
HDAC6-219ENST00000476625 IFNA6P05013 189 aa9.07□□□□□ -0.96
HDAC6-219ENST00000476625 GSTP1P09211 210 aaKnown RBP9.07□□□□□ -0.96
HDAC6-219ENST00000476625 FUT3P21217 361 aa9.07□□□□□ -0.96
HDAC6-219ENST00000476625 HTD2P86397 168 aa9.07□□□□□ -0.96
HDAC6-219ENST00000476625 MRPL28Q13084 256 aaKnown RBP9.07□□□□□ -0.96
HDAC6-219ENST00000476625 INSL4Q14641 139 aa9.07□□□□□ -0.96
HDAC6-219ENST00000476625 TMEM30BQ3MIR4 351 aa9.07□□□□□ -0.96
HDAC6-219ENST00000476625 STEAP3Q658P3 488 aa9.07□□□□□ -0.96
HDAC6-219ENST00000476625 TRAT1Q6PIZ9 186 aa9.07□□□□□ -0.96
HDAC6-219ENST00000476625 LINC00322Q6ZN03 302 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-219ENST00000476625 SETD6Q8TBK2 473 aa9.07□□□□□ -0.96
HDAC6-219ENST00000476625 SMIM19Q96E16 107 aa9.07□□□□□ -0.96
HDAC6-219ENST00000476625 PGLYRP3Q96LB9 341 aa9.07□□□□□ -0.96
HDAC6-219ENST00000476625 SPACA1Q9HBV2 294 aa9.07□□□□□ -0.96
HDAC6-219ENST00000476625 ERGIC3Q9Y282 383 aa9.07□□□□□ -0.96
HDAC6-219ENST00000476625 CEPT1Q9Y6K0 416 aa9.07□□□□□ -0.96
HDAC6-219ENST00000476625 TRBV5-7A0A0A0MS05 114 aa9.06□□□□□ -0.96
HDAC6-219ENST00000476625 C13orf42A0A1B0GVH6 325 aa9.06□□□□□ -0.96
HDAC6-219ENST00000476625 SNTNA6NMZ2 147 aa9.06□□□□□ -0.96
HDAC6-219ENST00000476625 SLC25A17O43808 307 aa9.06□□□□□ -0.96
HDAC6-219ENST00000476625 CD81P60033 236 aa9.06□□□□□ -0.96
HDAC6-219ENST00000476625 EWSR1Q01844 656 aaKnown RBP eCLIP9.06□□□□□ -0.96
HDAC6-219ENST00000476625 FXYD3Q14802 87 aa9.06□□□□□ -0.96
HDAC6-219ENST00000476625 AKIRIN2Q53H80 203 aa9.06□□□□□ -0.96
HDAC6-219ENST00000476625 TCTEX1D1Q8N7M0 179 aa9.06□□□□□ -0.96
HDAC6-219ENST00000476625 ZNF383Q8NA42 475 aa9.06□□□□□ -0.96
HDAC6-219ENST00000476625 POC5Q8NA72 575 aa9.06□□□□□ -0.96
HDAC6-219ENST00000476625 GALMQ96C23 342 aa9.06□□□□□ -0.96
HDAC6-219ENST00000476625 RANGRFQ9HD47 186 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-219ENST00000476625 FGF20Q9NP95 211 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-219ENST00000476625 MRPS18AQ9NVS2 196 aaKnown RBP9.06□□□□□ -0.96
HDAC6-219ENST00000476625 WASHC3Q9Y3C0 194 aa9.06□□□□□ -0.96
HDAC6-219ENST00000476625 HERC2O95714 4834 aa9.05□□□□□ -0.96
HDAC6-219ENST00000476625 A0A0A6YYD4 124 aa9.05□□□□□ -0.96
HDAC6-219ENST00000476625 GPX5O75715 221 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms