RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 OR6C1Q96RD1 312 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 ZNF407Q9C0G0 2248 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 F5H5K5 113 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 TGFAP01135 160 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 UMODP07911 640 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 TESK1Q15569 626 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 EXT1Q16394 746 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 COA6Q5JTJ3 125 aaKnown RBP7.15□□□□□ -1.26
VAPB-205ENST00000476395 VN1R17PQ8TDU5 208 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 TPPP3Q9BW30 176 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 P4HTMQ9NXG6 502 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 ATP23Q9Y6H3 246 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 CACNA1EQ15878 2313 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 IGHV5-10-1A0A0J9YXX1 117 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 LNP1A1A4G5 178 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 ZNF728P0DKX0 622 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 BCL2P10415 239 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 MSR1P21757 451 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 DUSP1P28562 367 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 PTTG1IPP53801 180 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 CLDN15P56746 228 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 GNMTQ14749 295 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 GUSBP11Q6P575 273 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 LIAT1Q6ZQX7 453 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 LYG1Q8N1E2 194 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 TMEM170AQ8WVE7 144 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 SMIM7Q9BQ49 75 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 TP73-AS1Q9UF72 201 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 CABIN1Q9Y6J0 2220 aa7.15□□□□□ -1.27
VAPB-205ENST00000476395 A0A0G2JMM0 328 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 A0A1W2PPB8 328 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 A0A1W2PRS3 328 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 KIR3DP1A8MWS1 328 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 SCGB2A1O75556 95 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 CCL3P10147 92 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 PDLIM4P50479 330 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 ZNF787Q6DD87 383 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 PLEKHJ1Q9NW61 149 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 RBM7Q9Y580 266 aaKnown RBP7.14□□□□□ -1.27
VAPB-205ENST00000476395 DPPA3Q6W0C5 159 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 PP6455Q8WZ26 134 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 PGAM5Q96HS1 289 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 IMMP2LQ96T52 175 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 SMDT1Q9H4I9 107 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 FSCN3Q9NQT6 498 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 TNRC6AQ8NDV7 1962 aaKnown RBP7.14□□□□□ -1.27
VAPB-205ENST00000476395 ADAM20O43506 726 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 ZNF266Q14584 549 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 IL13RA2Q14627 380 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 ACTL10Q5JWF8 245 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 SLC23A3Q6PIS1 610 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 NUFIP2Q7Z417 695 aaKnown RBP7.14□□□□□ -1.27
VAPB-205ENST00000476395 GPR35Q9HC97 309 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 OCIAD1Q9NX40 245 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 PPP1R3CQ9UQK1 317 aa7.14□□□□□ -1.27
VAPB-205ENST00000476395 KMT2EQ8IZD2 1858 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 ESPL1Q14674 2120 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 LOC102723996A0A087X1L8 192 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 A0A0J9YW62 118 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 A0A1B0GV72 72 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 OR6C6A6NF89 314 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 M0R135 149 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 PITX3O75364 302 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 SCRG1O75711 98 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 FRMD6-AS1P0C7T7 363 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 PATE4P0C8F1 98 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 COL8A2P25067 703 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 ARL4DP49703 201 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 LINC00310P59036 64 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 RPL23P62829 140 aaKnown RBP7.13□□□□□ -1.27
VAPB-205ENST00000476395 ZNF92Q03936 586 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 TPTE2P1Q5T6R2 138 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 UNQ5815/PRO19632Q6UWF5 114 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 SAXO1Q8IYX7 474 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 ZNF799Q96GE5 643 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 C5orf30Q96GV9 206 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 IMMP1LQ96LU5 166 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 MTCH1Q9NZJ7 389 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 POLR1DQ9Y2S0 133 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 CUL9Q8IWT3 2517 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 PI4KAP42356 2102 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 LOC105371242A0A075B767 164 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 H7BYZ3 331 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 ZNHIT1O43257 154 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 KLF7O75840 302 aaPredicted RBP7.13□□□□□ -1.27
VAPB-205ENST00000476395 CEACAM3P40198 252 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 CNN1P51911 297 aaKnown RBP7.13□□□□□ -1.27
VAPB-205ENST00000476395 CCL7P80098 99 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 BHLHA15Q7RTS1 189 aaPredicted RBP7.13□□□□□ -1.27
VAPB-205ENST00000476395 GGNQ86UU5 652 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 BOD1L2Q8IYS8 172 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 CPT1CQ8TCG5 803 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 PRSS50Q9UI38 385 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 TP53TG3Q9ULZ0 132 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 ZFP30Q9Y2G7 519 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 GTF3C1Q12789 2109 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 B4DEV8 164 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 C3orf80F5H4A9 247 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 K7ESF4 209 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 CHST1O43916 411 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms