RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 PLAC9Q5JTB6 97 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 LPCAT3Q6P1A2 487 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 FAM122CQ6P4D5 195 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 FBXW12Q6X9E4 464 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 ACOT7LQ6ZUV0 252 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 NAA40Q86UY6 237 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 LRP11Q86VZ4 500 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM17Q86X19 198 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 ZCCHC24Q8N2G6 241 aaKnown RBP3.51□□□□□ -1.85
VPS13D-206ENST00000476045 LRRC18Q8N456 261 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.51□□□□□ -1.85
VPS13D-206ENST00000476045 INO80EQ8NBZ0 244 aaPredicted RBP3.51□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM104Q8NE00 496 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 CSNK2A3Q8NEV1 391 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 OR52H1Q8NGJ2 320 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 OR51T1Q8NGJ9 327 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 OR5D18Q8NGL1 313 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 OR1S2Q8NGQ3 325 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 OR5H2Q8NGV7 314 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 OR13G1Q8NGZ3 307 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 SLC25A40Q8TBP6 338 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 MITD1Q8WV92 249 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 PPP1R1CQ8WVI7 109 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 ASB13Q8WXK3 278 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 ERGIC1Q969X5 290 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 PTX4Q96A99 478 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 APOBEC3DQ96AK3 386 aaPredicted RBP3.51□□□□□ -1.85
VPS13D-206ENST00000476045 RAB3CQ96E17 227 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 ARHGAP5-AS1Q96IT6 56 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 OR2J1Q9GZK6 312 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 WNT5BQ9H1J7 359 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 ZC4H2Q9NQZ6 224 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 PLEK2Q9NYT0 353 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 TREM2Q9NZC2 230 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 IL19Q9UHD0 177 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 SHPKQ9UHJ6 478 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 CYB5R1Q9UHQ9 305 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 ZNF107Q9UII5 783 aaPredicted RBP3.51□□□□□ -1.85
VPS13D-206ENST00000476045 PURGQ9UJV8 347 aaKnown RBP3.51□□□□□ -1.85
VPS13D-206ENST00000476045 FZR1Q9UM11 496 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 PRELID1Q9Y255 219 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 IGKV1-9A0A0C4DH69 117 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM89A2RUT3 159 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 MPTX1A8MV57 137 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 F5H5K5 113 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 LYNX1G3V0Z9 82 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 H0YIZ8 118 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 TOR1AO14656 332 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 SPRY3O43610 288 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 TSPAN9O75954 239 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 SCGNO76038 276 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 DUS4LO95620 317 aaKnown RBP3.5□□□□□ -1.85
VPS13D-206ENST00000476045 SFTPBP07988 381 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 CHRM2P08172 466 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 HOXB5P09067 269 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 PATE4P0C8F1 98 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 LYNX1P0DP58 116 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 CCL2P13500 99 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 RPS2P15880 293 aaKnown RBP3.5□□□□□ -1.85
VPS13D-206ENST00000476045 HLA-GP17693 338 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 SERPINA2P20848 420 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 GLRA1P23415 457 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 COL8A2P25067 703 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 PSMB6P28072 239 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 BLVRBP30043 206 aaPredicted RBP3.5□□□□□ -1.85
VPS13D-206ENST00000476045 MPV17P39210 176 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 WNT5AP41221 380 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 AKR1C2P52895 323 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM50BP56557 158 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 BPIFB3P59826 476 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 S100A10P60903 97 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 ERVS71-1P61550 626 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 AKR1C1Q04828 323 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 ENDOGQ14249 297 aaKnown RBP3.5□□□□□ -1.85
VPS13D-206ENST00000476045 ANKRD55Q3KP44 614 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 SPATA46Q5T0L3 261 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 ZNF774Q6NX45 483 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 FAHD2BQ6P2I3 314 aaPredicted RBP3.5□□□□□ -1.85
VPS13D-206ENST00000476045 BTNL3Q6UXE8 466 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 C9orf139Q6ZV77 190 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 MOB3CQ70IA8 216 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 PGAP1Q75T13 922 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 HOGA1Q86XE5 327 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 FOXRED2Q8IWF2 684 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 EIF4E3Q8N5X7 224 aaKnown RBP3.5□□□□□ -1.85
VPS13D-206ENST00000476045 C3orf56Q8N813 242 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 ZSCAN4Q8NAM6 433 aaPredicted RBP3.5□□□□□ -1.85
VPS13D-206ENST00000476045 POC1AQ8NBT0 407 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 BHLHE23Q8NDY6 225 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 GJC3Q8NFK1 279 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 OR56B1Q8NGI3 324 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 AKR7LQ8NHP1 331 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 TERB2Q8NHR7 220 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 KCNG3Q8TAE7 436 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 LHFPL5Q8TAF8 219 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 FGFBP3Q8TAT2 258 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 MARC2Q969Z3 335 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM230Q96A57 120 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 RRNAD1Q96FB5 475 aaKnown RBP3.5□□□□□ -1.85
VPS13D-206ENST00000476045 FAHD2AQ96GK7 314 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms