RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 GNG12Q9UBI6 72 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF221Q9UK13 617 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 LOC105371242A0A075B767 164 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 IGHV4-30-2A0A087WSY4 118 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 A0A0A6YYJ9 748 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 PPIAL4CA0A0B4J2A2 164 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 DUXBA0A1W2PPF3 345 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 C9orf170A2RU37 121 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 OR5H14A6NHG9 310 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 FAM229AH3BQW9 127 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 C15orf65H3BRN8 121 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 M0R1W7 72 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 MPPED1O15442 326 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 NDUFS7O75251 213 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 SFT2D2O95562 160 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 IFNA21P01568 189 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 AADACP22760 399 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 IL3RAP26951 378 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 RBMXP38159 391 aaKnown RBP5.79□□□□□ -1.48
SHQ1-207ENST00000475558 ARHGDIBP52566 201 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 RRAS2P62070 204 aaPredicted RBP5.79□□□□□ -1.48
SHQ1-207ENST00000475558 FGL1Q08830 312 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 CATR1Q13166 79 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 EDDM3AQ14507 147 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 MORN2Q502X0 79 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 IGSF11Q5DX21 431 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 FAM201AQ5SY85 155 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 WDR25Q64LD2 544 aaPredicted RBP5.79□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF626Q68DY1 528 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 TMEM200BQ69YZ2 307 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 CYB5R2Q6BCY4 276 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 TMED4Q7Z7H5 227 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 LYG2Q86SG7 212 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 LGI3Q8N145 548 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 C12orf45Q8N5I9 185 aaPredicted RBP5.79□□□□□ -1.48
SHQ1-207ENST00000475558 LINC00311Q8N616 119 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 KIR3DL3Q8N743 410 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 OR2AK2Q8NG84 335 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 OR13A1Q8NGR1 328 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 MARCH1Q8TCQ1 289 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 MITD1Q8WV92 249 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 RTN4IP1Q8WWV3 396 aaPredicted RBP5.79□□□□□ -1.48
SHQ1-207ENST00000475558 IL22RA2Q969J5 263 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 UPRTQ96BW1 309 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 S1PR3Q99500 378 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 HSD17B10Q99714 261 aaKnown RBP5.79□□□□□ -1.48
SHQ1-207ENST00000475558 RTBDNQ9BSG5 229 aaPredicted RBP5.79□□□□□ -1.48
SHQ1-207ENST00000475558 SSBP3Q9BWW4 388 aaPredicted RBP5.79□□□□□ -1.48
SHQ1-207ENST00000475558 HEATR1Q9H583 2144 aaKnown RBP5.79□□□□□ -1.48
SHQ1-207ENST00000475558 C5orf66Q9H5L9 145 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 HEXA-AS1Q9H8Q6 139 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 GFOD1Q9NXC2 390 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 POLR3KQ9Y2Y1 108 aaPredicted RBP5.79□□□□□ -1.48
SHQ1-207ENST00000475558 MALRD1Q5VYJ5 2156 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 PLCE1Q9P212 2302 aa5.79□□□□□ -1.48
SHQ1-207ENST00000475558 IGKV1D-8A0A087WSZ0 117 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 A0A087X0M5 115 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 A0A096LNT2 108 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 A0A1B0GX30 115 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 C17orf98A8MV24 154 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 VGLL3A8MV65 326 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 F5H0A9 414 aaPredicted RBP5.78□□□□□ -1.48
SHQ1-207ENST00000475558 TOR1AO14656 332 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 RAB29O14966 203 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 ENSAO43768 121 aaKnown RBP5.78□□□□□ -1.48
SHQ1-207ENST00000475558 CCNKO75909 580 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF205O95201 554 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 LY86O95711 162 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 PPIAL4GP0DN37 164 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 RRASP10301 218 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 SPNP16150 400 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 AKR1C4P17516 323 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 SRD5A1P18405 259 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 NFYAP23511 347 aaPredicted RBP5.78□□□□□ -1.48
SHQ1-207ENST00000475558 GATA3P23771 443 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 GNRHRP30968 328 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 KIR2DS2P43631 304 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 CEBPDP49716 269 aaPredicted RBP5.78□□□□□ -1.48
SHQ1-207ENST00000475558 PIGPP57054 158 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 ERVFRD-1P60508 538 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 CBX3Q13185 183 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 C17orf58Q2M2W7 97 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 FAM71F2Q6NXP2 309 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF841Q6ZN19 808 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 AKAP14Q86UN6 197 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 CADM3Q8N126 398 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF645Q8N7E2 425 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 FAM216BQ8N7L0 139 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 LRTM2Q8N967 370 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 LY6G5BQ8NDX9 201 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 OR13D1Q8NGV5 346 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF596Q8TC21 504 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 MAFIPQ8WZ33 124 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 H1FXQ92522 213 aaKnown RBP5.78□□□□□ -1.48
SHQ1-207ENST00000475558 TMEM186Q96B77 213 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 RANBP3Q9H6Z4 567 aaPredicted RBP5.78□□□□□ -1.48
SHQ1-207ENST00000475558 METTL8Q9H825 291 aaKnown RBP5.78□□□□□ -1.48
SHQ1-207ENST00000475558 RAB18Q9NP72 206 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF581Q9P0T4 197 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 RPUSD1Q9UJJ7 312 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms