RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 ZNF554Q86TJ5 538 aa15.65■□□□□ 0.1
VPS36-203ENST00000475375 MRPL30Q8TCC3 161 aaKnown RBP15.65■□□□□ 0.1
VPS36-203ENST00000475375 CYYR1Q96J86 154 aa15.65■□□□□ 0.1
VPS36-203ENST00000475375 RANGRFQ9HD47 186 aaPredicted RBP15.65■□□□□ 0.1
VPS36-203ENST00000475375 RETNQ9HD89 108 aa15.65■□□□□ 0.1
VPS36-203ENST00000475375 STEAP1Q9UHE8 339 aa15.65■□□□□ 0.1
VPS36-203ENST00000475375 RPL36Q9Y3U8 105 aaKnown RBP15.65■□□□□ 0.1
VPS36-203ENST00000475375 ANKRD34BA5PLL1 514 aa15.64■□□□□ 0.09
VPS36-203ENST00000475375 ST8SIA5O15466 376 aa15.64■□□□□ 0.09
VPS36-203ENST00000475375 TFAP2AP05549 437 aa15.64■□□□□ 0.09
VPS36-203ENST00000475375 IGFBP3P17936 291 aaPredicted RBP15.64■□□□□ 0.09
VPS36-203ENST00000475375 OR2G6Q5TZ20 316 aa15.64■□□□□ 0.09
VPS36-203ENST00000475375 GLDNQ6ZMI3 551 aaPredicted RBP15.64■□□□□ 0.09
VPS36-203ENST00000475375 TMPRSS11AQ6ZMR5 421 aa15.64■□□□□ 0.09
VPS36-203ENST00000475375 IL1F10Q8WWZ1 152 aa15.64■□□□□ 0.09
VPS36-203ENST00000475375 IFI27L2Q9H2X8 130 aa15.64■□□□□ 0.09
VPS36-203ENST00000475375 METTL1Q9UBP6 276 aaKnown RBP15.64■□□□□ 0.09
VPS36-203ENST00000475375 TRAV8-7A0A075B6U6 113 aa15.63■□□□□ 0.09
VPS36-203ENST00000475375 FAM90A7PA6NKC0 464 aa15.63■□□□□ 0.09
VPS36-203ENST00000475375 FAM90A23PA8MXZ1 464 aa15.63■□□□□ 0.09
VPS36-203ENST00000475375 BAG2O95816 211 aa15.63■□□□□ 0.09
VPS36-203ENST00000475375 GLAP06280 429 aa15.63■□□□□ 0.09
VPS36-203ENST00000475375 PLECQ15149 4684 aaKnown RBP15.63■□□□□ 0.09
VPS36-203ENST00000475375 RPL39P5Q59GN2 51 aa15.63■□□□□ 0.09
VPS36-203ENST00000475375 RHOXF1Q8NHV9 184 aa15.63■□□□□ 0.09
VPS36-203ENST00000475375 PYDC1Q8WXC3 89 aa15.63■□□□□ 0.09
VPS36-203ENST00000475375 SMIM19Q96E16 107 aa15.63■□□□□ 0.09
VPS36-203ENST00000475375 PIPOXQ9P0Z9 390 aa15.63■□□□□ 0.09
VPS36-203ENST00000475375 ABRACLQ9P1F3 81 aa15.63■□□□□ 0.09
VPS36-203ENST00000475375 OR5H14A6NHG9 310 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 RAB29O14966 203 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 PDCD6O75340 191 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 CIB2O75838 187 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 CA2P00918 260 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 ETV1P50549 477 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 RASSF2P50749 326 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 DMKNQ6E0U4 476 aaPredicted RBP15.62■□□□□ 0.09
VPS36-203ENST00000475375 SIGIRRQ6IA17 410 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 FAM71F2Q6NXP2 309 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 CBR4Q8N4T8 237 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 OR9G4Q8NGQ1 327 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 GRPEL2Q8TAA5 225 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 Q96M66 194 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 FAM110AQ9BQ89 295 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 WASHC3Q9Y3C0 194 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 LRRC42Q9Y546 428 aa15.62■□□□□ 0.09
VPS36-203ENST00000475375 A0A1W2PPK0 400 aa15.61■□□□□ 0.09
VPS36-203ENST00000475375 RBBP9O75884 186 aa15.61■□□□□ 0.09
VPS36-203ENST00000475375 CT45A6P0DMU7 189 aa15.61■□□□□ 0.09
VPS36-203ENST00000475375 CT45A5P0DMU8 189 aa15.61■□□□□ 0.09
VPS36-203ENST00000475375 CT45A7P0DMV0 189 aa15.61■□□□□ 0.09
VPS36-203ENST00000475375 MC5RP33032 325 aa15.61■□□□□ 0.09
VPS36-203ENST00000475375 SYNJ2BPP57105 145 aa15.61■□□□□ 0.09
VPS36-203ENST00000475375 Q499Y3 187 aa15.61■□□□□ 0.09
VPS36-203ENST00000475375 LY6G6FQ5SQ64 297 aa15.61■□□□□ 0.09
VPS36-203ENST00000475375 LCN12Q6JVE5 192 aa15.61■□□□□ 0.09
VPS36-203ENST00000475375 ZNF562Q6V9R5 426 aa15.61■□□□□ 0.09
VPS36-203ENST00000475375 GHSRQ92847 366 aa15.61■□□□□ 0.09
VPS36-203ENST00000475375 FAM46BQ96A09 425 aa15.61■□□□□ 0.09
VPS36-203ENST00000475375 MRPS18AQ9NVS2 196 aaKnown RBP15.61■□□□□ 0.09
VPS36-203ENST00000475375 TRBV5-5A0A0J9YX44 114 aa15.6■□□□□ 0.09
VPS36-203ENST00000475375 H0YJW9 148 aa15.6■□□□□ 0.09
VPS36-203ENST00000475375 GPX5O75715 221 aa15.6■□□□□ 0.09
VPS36-203ENST00000475375 KLF5Q13887 457 aaPredicted RBP15.6■□□□□ 0.09
VPS36-203ENST00000475375 C6orf141Q5SZD1 244 aa15.6■□□□□ 0.09
VPS36-203ENST00000475375 POC5Q8NA72 575 aa15.6■□□□□ 0.09
VPS36-203ENST00000475375 FGF20Q9NP95 211 aaPredicted RBP15.6■□□□□ 0.09
VPS36-203ENST00000475375 BABAM2Q9NXR7 383 aa15.6■□□□□ 0.09
VPS36-203ENST00000475375 SLC23A1Q9UHI7 598 aa15.6■□□□□ 0.09
VPS36-203ENST00000475375 CEPT1Q9Y6K0 416 aa15.6■□□□□ 0.09
VPS36-203ENST00000475375 A0A0G2JLM5 398 aa15.59■□□□□ 0.09
VPS36-203ENST00000475375 SLC22A1O15245 554 aa15.59■□□□□ 0.09
VPS36-203ENST00000475375 OGG1O15527 345 aa15.59■□□□□ 0.09
VPS36-203ENST00000475375 FSTP19883 344 aa15.59■□□□□ 0.09
VPS36-203ENST00000475375 PSG5Q15238 335 aa15.59■□□□□ 0.09
VPS36-203ENST00000475375 HMGN3Q15651 99 aa15.59■□□□□ 0.09
VPS36-203ENST00000475375 OR5T1Q8NG75 326 aa15.59■□□□□ 0.09
VPS36-203ENST00000475375 ABHD14BQ96IU4 210 aa15.59■□□□□ 0.09
VPS36-203ENST00000475375 NEDD4LQ96PU5 975 aa15.59■□□□□ 0.09
VPS36-203ENST00000475375 SNRPBP14678 240 aaKnown RBP15.58■□□□□ 0.08
VPS36-203ENST00000475375 CPEP16870 476 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 CAPGP40121 348 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 FXYD3Q14802 87 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 MOGAT2Q3SYC2 334 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 YIF1BQ5BJH7 314 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 IL34Q6ZMJ4 242 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 Q8N402 240 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 ZFP41Q8N8Y5 198 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 SETD6Q8TBK2 473 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 APH1BQ8WW43 257 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 OR14A2Q96R54 314 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 RNF5Q99942 180 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 KRTAP17-1Q9BYP8 105 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 HIPK2Q9H2X6 1198 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 PLEKHA3Q9HB20 300 aa15.58■□□□□ 0.08
VPS36-203ENST00000475375 CHMP1AQ9HD42 196 aaPredicted RBP15.58■□□□□ 0.08
VPS36-203ENST00000475375 ALMS1Q8TCU4 4167 aa15.57■□□□□ 0.08
VPS36-203ENST00000475375 LOC100130705A0A1B0GUX0 176 aa15.57■□□□□ 0.08
VPS36-203ENST00000475375 SHISA3A0PJX4 238 aa15.57■□□□□ 0.08
VPS36-203ENST00000475375 CNIH1O95406 144 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms