RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 RAB5AP20339 215 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 S100A2P29034 98 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 RPL12P30050 165 aaKnown RBP3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 RAB5CP51148 216 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 PIGPP57054 158 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 FXYD4P59646 89 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 FAM3AP98173 230 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 PSG7Q13046 419 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 GAMTQ14353 236 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 MSMPQ1L6U9 139 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 AWAT1Q58HT5 328 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 GGNBP1Q5YKI7 109 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 MRPL21Q7Z2W9 205 aaKnown RBP3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 KRTAP1-3Q8IUG1 177 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 OSR2Q8N2R0 312 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 UBAC2Q8NBM4 344 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 OR8G5Q8NG78 346 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 OR10AD1Q8NGE0 317 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 OR10D4PQ8NGN7 298 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 RDH5Q92781 318 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 SPSB4Q96A44 273 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 SPSB1Q96BD6 273 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 Q96MF0 132 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 AQP10Q96PS8 301 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 ATG101Q9BSB4 218 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 TAF9BQ9HBM6 251 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 GFOD1Q9NXC2 390 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 HSF4Q9ULV5 492 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 ST3GAL6Q9Y274 331 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 KCNIP3Q9Y2W7 256 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 PRR14LQ5THK1 2151 aa3.51□□□□□ -1.85
GAPVD1-216ENST00000474637 C7orf77A4D0Y5 90 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 CRYM-AS1A6NIL9 109 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 IFITM10A6NMD0 228 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 K7EPK0 472 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 TCAPO15273 167 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 MED6O75586 246 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 SCGB1D2O95969 90 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 IFNA21P01568 189 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 CTSDP07339 412 aaPredicted RBP3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 FCGR3AP08637 254 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 PET100P0DJ07 73 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 ZNF728P0DKX0 622 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 TNFRSF1AP19438 455 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 CHATP28329 748 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 FCGR2CP31995 323 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 GLP1RP43220 463 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 RPS10P46783 165 aaKnown RBP3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 NPBWR2P48146 333 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 CAV2P51636 162 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 FUT6P51993 359 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 TMEM33P57088 247 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 CNN3Q15417 329 aaKnown RBP3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 ALKBH6Q3KRA9 238 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 ABCA11PQ4W5N1 156 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 TMEM42Q69YG0 159 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 ASCL4Q6XD76 172 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 LHFPL2Q6ZUX7 228 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 LYZL2Q7Z4W2 148 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 C5orf24Q7Z6I8 188 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 CALHM1Q8IU99 346 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 FAM71E2Q8N5Q1 922 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 C10orf105Q8TEF2 133 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 RTN4IP1Q8WWV3 396 aaPredicted RBP3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 TMEM68Q96MH6 324 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 SMIM3Q9BZL3 60 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 PRDM13Q9H4Q3 707 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 CHODLQ9H9P2 273 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 NECAP2Q9NVZ3 263 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 GAR1Q9NY12 217 aaKnown RBP3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 PLA2G2EQ9NZK7 142 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 DNAJB11Q9UBS4 358 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 LPAR3Q9UBY5 353 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 CACFD1Q9UGQ2 172 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 IL19Q9UHD0 177 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 SLC7A11Q9UPY5 501 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 LSM5Q9Y4Y9 91 aaKnown RBP3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 ABCA12Q86UK0 2595 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 ABCA4P78363 2273 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 A0A1B0GV50 99 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 A0A1B0GWJ7 208 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 ANKRD30BLA7E2S9 258 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 SPRY3O43610 288 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 DEDDO75618 318 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 IGHV1-46P01743 117 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 MBPP02686 304 aaPredicted RBP3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 OR5AC1P0C628 307 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 DDTP30046 118 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 ECI1P42126 302 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 LPAR6P43657 344 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 PCP4P48539 62 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 SPCS3P61009 180 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 TNFAIP6P98066 277 aaPredicted RBP3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 KIAA0141Q14154 515 aaPredicted RBP3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 PHLDA2Q53GA4 152 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 GFI1BQ5VTD9 330 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 PLCXD3Q63HM9 321 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 OR2T2Q6IF00 324 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 IL34Q6ZMJ4 242 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms