RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 MTFP1Q9UDX5 166 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 KCNE5Q9UJ90 142 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 MED31Q9Y3C7 131 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 PAM16Q9Y3D7 125 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 OR1A2Q9Y585 309 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 SOX21Q9Y651 276 aaPredicted RBP2.9□□□□□ -1.94
UBR3-208ENST00000474426 PTPRKQ15262 1439 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 EDC4Q6P2E9 1401 aaKnown RBP2.9□□□□□ -1.94
UBR3-208ENST00000474426 MAST1Q9Y2H9 1570 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 RBBP6Q7Z6E9 1792 aaKnown RBP2.9□□□□□ -1.94
UBR3-208ENST00000474426 SBF2Q86WG5 1849 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 MEGF11A6BM72 1044 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 C5orf63A6NC05 138 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 C9JQL5 133 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 J3QR89 54 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 K7EP34 96 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 GEMIN2O14893 280 aaKnown RBP2.9□□□□□ -1.95
UBR3-208ENST00000474426 AVPP01185 164 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 SLC25A6P12236 298 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 EMDP50402 254 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 TRPT1Q86TN4 253 aaKnown RBP2.9□□□□□ -1.95
UBR3-208ENST00000474426 BCL6BQ8N143 479 aaPredicted RBP2.9□□□□□ -1.95
UBR3-208ENST00000474426 C1orf158Q8N1D5 194 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 PSMF1Q92530 271 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 ZNF837Q96EG3 531 aaPredicted RBP2.9□□□□□ -1.95
UBR3-208ENST00000474426 BMFQ96LC9 184 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 SCGB3A2Q96PL1 93 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 FOXC2Q99958 501 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 AGMATQ9BSE5 352 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 DLL3Q9NYJ7 618 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 NSG2Q9Y328 171 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 X6R8D5 127 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 CEP170BQ9Y4F5 1589 aaPredicted RBP2.9□□□□□ -1.95
UBR3-208ENST00000474426 MUC21A0A0G2JKD1 596 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 BCL2L11O43521 198 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 EDIL3O43854 480 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 NUDT14O95848 222 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 PGA4P0DJD7 388 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 PGA5P0DJD9 388 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 PMAIP1Q13794 54 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 RSPO4Q2I0M5 234 aaPredicted RBP2.9□□□□□ -1.95
UBR3-208ENST00000474426 PHLDA2Q53GA4 152 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 Q6ZN92 141 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 C9orf40Q8IXQ3 194 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 SPATA3Q8NHX4 192 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 MCHR1Q99705 422 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 DUSP21Q9H596 190 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 RBM22Q9NW64 420 aaKnown RBP eCLIP2.9□□□□□ -1.95
UBR3-208ENST00000474426 TPRKBQ9Y3C4 175 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 IER3IP1Q9Y5U9 82 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 MYO5AQ9Y4I1 1855 aaKnown RBP2.9□□□□□ -1.95
UBR3-208ENST00000474426 NWD1Q149M9 1564 aa2.9□□□□□ -1.95
UBR3-208ENST00000474426 TRAV18A0A075B6X5 111 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 TRGV10A0A0A0MS01 117 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 CHEK1O14757 476 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 FGF10O15520 208 aaPredicted RBP2.89□□□□□ -1.95
UBR3-208ENST00000474426 IGKV5-2P06315 115 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 GPX3P22352 226 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 GADD45AP24522 165 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 ENDOGQ14249 297 aaKnown RBP2.89□□□□□ -1.95
UBR3-208ENST00000474426 GSG1Q2KHT4 349 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 MIIPQ5JXC2 388 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 APOOLQ6UXV4 268 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 PGBD5Q8N414 524 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 GPR26Q8NDV2 337 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 SLC25A40Q8TBP6 338 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 PEBP4Q96S96 227 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 KIR2DL4Q99706 377 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 OR51E2Q9H255 320 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 AP5S1Q9NUS5 200 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 SPANXCQ9NY87 97 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 NUP210Q8TEM1 1887 aaPredicted RBP2.89□□□□□ -1.95
UBR3-208ENST00000474426 ABCC1P33527 1531 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 VWA8A3KMH1 1905 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 SETBP1Q9Y6X0 1596 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 A0A1B0GTH9 108 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 ETV2O00321 342 aaPredicted RBP2.89□□□□□ -1.95
UBR3-208ENST00000474426 REM1O75628 298 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 WISP1O95388 367 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 IGHMP01871 453 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 HLA-DQB2P05538 268 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 LGALS1P09382 135 aaKnown RBP2.89□□□□□ -1.95
UBR3-208ENST00000474426 SNCAP37840 140 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 DGCR2P98153 550 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 SRYQ05066 204 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 KLRD1Q13241 179 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 PMVKQ15126 192 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 TSPO2Q5TGU0 170 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 TMEM91Q6ZNR0 172 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 GDPGP1Q6ZNW5 385 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 ANKRD37Q7Z713 158 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 GAPTQ8N292 157 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 LINC01356Q8N9X3 169 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 OR4B1Q8NGF8 309 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 PDCD1LG2Q9BQ51 273 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 EHFQ9NZC4 300 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 KCNIP1Q9NZI2 227 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 HECW1Q76N89 1606 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 TMED7-TICAM2A0A0A6YYA0 188 aa2.89□□□□□ -1.95
UBR3-208ENST00000474426 TCRBV7S3A2A0A539 114 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms