RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 FAM90A24PP0C7X0 464 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 ZNF32P17041 273 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 EGR1P18146 543 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 CD38P28907 300 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 MPLP40238 635 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 Q8NFD4 153 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 SGMS2Q8NHU3 365 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 BTF3L4Q96K17 158 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 PATZ1Q9HBE1 687 aaKnown RBP15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 TMEM9BQ9NQ34 198 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 OR6C6A6NF89 314 aa15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 C11orf94C9JXX5 98 aa15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 C1QTNF9P0C862 333 aa15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 DEFA4P12838 97 aa15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 CLDN15P56746 228 aa15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 PAFAH1B2P68402 229 aa15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 ZNF324BQ6AW86 544 aaPredicted RBP15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 C20orf204Q6ZNR8 217 aa15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 FADS6Q8N9I5 356 aa15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 ZIC4Q8N9L1 334 aa15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 RYDENQ9NUL5 291 aaKnown RBP15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 ERRFI1Q9UJM3 462 aaPredicted RBP15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 WDR87Q6ZQQ6 2873 aa15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 PIGBOS1A0A0B4J2F0 54 aa15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 CHRNB4P30926 498 aa15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 PMP22Q01453 160 aa15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 FOXJ2Q9P0K8 574 aa15.79■□□□□ 0.12
ECHDC1-214ENST00000474289 COMPP49747 757 aaPredicted RBP15.78■□□□□ 0.12
ECHDC1-214ENST00000474289 DERL1Q9BUN8 251 aa15.78■□□□□ 0.12
ECHDC1-214ENST00000474289 FGF21Q9NSA1 209 aa15.78■□□□□ 0.12
ECHDC1-214ENST00000474289 ZNF391Q9UJN7 358 aa15.78■□□□□ 0.12
ECHDC1-214ENST00000474289 IGHV1OR21-1A0A087WYE8 117 aa15.78■□□□□ 0.12
ECHDC1-214ENST00000474289 PGPEP1LA6NFU8 196 aa15.78■□□□□ 0.12
ECHDC1-214ENST00000474289 SERF1AO75920 110 aa15.78■□□□□ 0.12
ECHDC1-214ENST00000474289 FKBP2P26885 142 aaKnown RBP15.78■□□□□ 0.12
ECHDC1-214ENST00000474289 MLF1P58340 268 aa15.78■□□□□ 0.12
ECHDC1-214ENST00000474289 YPEL3P61236 119 aaPredicted RBP15.78■□□□□ 0.12
ECHDC1-214ENST00000474289 SELENOTP62341 195 aa15.78■□□□□ 0.12
ECHDC1-214ENST00000474289 ZNF501Q96CX3 271 aaPredicted RBP15.78■□□□□ 0.12
ECHDC1-214ENST00000474289 SLC35E1Q96K37 410 aa15.78■□□□□ 0.12
ECHDC1-214ENST00000474289 ZDHHC11Q9H8X9 412 aa15.78■□□□□ 0.12
ECHDC1-214ENST00000474289 TMPRSS2O15393 492 aa15.77■□□□□ 0.12
ECHDC1-214ENST00000474289 VAMP5O95183 116 aa15.77■□□□□ 0.12
ECHDC1-214ENST00000474289 CRYAAP02489 173 aa15.77■□□□□ 0.12
ECHDC1-214ENST00000474289 B4GALT1P15291 398 aa15.77■□□□□ 0.12
ECHDC1-214ENST00000474289 EPHA8P29322 1005 aaPredicted RBP15.77■□□□□ 0.12
ECHDC1-214ENST00000474289 FGF12P61328 243 aa15.77■□□□□ 0.12
ECHDC1-214ENST00000474289 KRTAP27-1Q3LI81 207 aa15.77■□□□□ 0.12
ECHDC1-214ENST00000474289 FFAR4Q5NUL3 377 aa15.77■□□□□ 0.12
ECHDC1-214ENST00000474289 TMEM14EPQ6UXP3 125 aa15.77■□□□□ 0.12
ECHDC1-214ENST00000474289 ZNF114Q8NC26 417 aa15.77■□□□□ 0.12
ECHDC1-214ENST00000474289 CLDN23Q96B33 292 aa15.77■□□□□ 0.12
ECHDC1-214ENST00000474289 STRADBQ9C0K7 418 aa15.77■□□□□ 0.12
ECHDC1-214ENST00000474289 MSL2Q9HCI7 577 aa15.77■□□□□ 0.12
ECHDC1-214ENST00000474289 PPIAL4AQ9Y536 164 aa15.77■□□□□ 0.12
ECHDC1-214ENST00000474289 TNFSF11O14788 317 aa15.77■□□□□ 0.11
ECHDC1-214ENST00000474289 ESDP10768 282 aa15.77■□□□□ 0.11
ECHDC1-214ENST00000474289 GNB1P62873 340 aa15.77■□□□□ 0.11
ECHDC1-214ENST00000474289 PSG4Q00888 419 aa15.77■□□□□ 0.11
ECHDC1-214ENST00000474289 TECTBQ96PL2 329 aa15.77■□□□□ 0.11
ECHDC1-214ENST00000474289 A0A1W2PR77 199 aa15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 RBFOX2O43251 390 aaKnown RBP eCLIP15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 TRAPPC6AO75865 159 aa15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 CLDN1O95832 211 aa15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 IGLV2-14P01704 120 aa15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 BMP5P22003 454 aa15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 LHX2P50458 406 aa15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 RBX1P62877 108 aa15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 MMDQ15546 238 aa15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 ZNF784Q8NCA9 323 aaPredicted RBP15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 OR5AU1Q8NGC0 362 aa15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 RNASE8Q8TDE3 154 aaKnown RBP15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 ZNF585BQ52M93 769 aa15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 AGBL5Q8NDL9 886 aa15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 SPACA9Q96E40 222 aaPredicted RBP15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 SFRP2Q96HF1 295 aa15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 CIB3Q96Q77 187 aaPredicted RBP15.76■□□□□ 0.11
ECHDC1-214ENST00000474289 LMO7DNF2Z398 122 aa15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 NDUFB4O95168 129 aa15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 COX5AP20674 150 aa15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 CBLN1P23435 193 aa15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 MSMO1Q15800 293 aa15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 FBXO46Q6PJ61 603 aaPredicted RBP15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 FGFBP3Q8TAT2 258 aa15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 FGF23Q9GZV9 251 aaPredicted RBP15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 TMEM38BQ9NVV0 291 aa15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 PPP1R3CQ9UQK1 317 aa15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 ZFAND5O76080 213 aa15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 EN2P19622 333 aaPredicted RBP15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 TFF3Q07654 80 aa15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 OR5P3Q8WZ94 311 aa15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 ALKBH3Q96Q83 286 aaPredicted RBP15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 RNF114Q9Y508 228 aa15.75■□□□□ 0.11
ECHDC1-214ENST00000474289 BRWD1Q9NSI6 2320 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 IGHV1OR15-9A0A0B4J2B8 117 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 NDUFB8O95169 186 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 CRISP2P16562 243 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 ZNF16P17020 682 aaPredicted RBP15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 NTF4P34130 210 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 ATP5G3P48201 142 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms