RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 KRT222Q8N1A0 295 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 C3orf22Q8N5N4 141 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 TMEM86BQ8N661 226 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 C2orf15Q8WU43 125 aaKnown RBP1.2□□□□□ -2.22
SSB-210ENST00000474273 RAB8BQ92930 207 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 PPP1R14BQ96C90 147 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 YPEL4Q96NS1 127 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 OLFM3Q96PB7 478 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 TRIB3Q96RU7 358 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 C9orf16Q9BUW7 83 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 EBPLQ9BY08 206 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 SLC25A31Q9H0C2 315 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 GABARAPL1Q9H0R8 117 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 OR51V1Q9H2C8 321 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 MAP1LC3AQ9H492 121 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 DIABLOQ9NR28 239 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 GUCA1BQ9UMX6 200 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 ZNF780BQ9Y6R6 833 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 COL18A1P39060 1754 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 ADGRL3Q9HAR2 1447 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 CHD1O14646 1710 aa1.2□□□□□ -2.22
SSB-210ENST00000474273 TRPM3Q9HCF6 1732 aaPredicted RBP1.2□□□□□ -2.22
SSB-210ENST00000474273 CHD2O14647 1828 aaKnown RBP1.19□□□□□ -2.22
SSB-210ENST00000474273 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 NRCAMQ92823 1304 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 TARBP1Q13395 1621 aaKnown RBP1.19□□□□□ -2.22
SSB-210ENST00000474273 IGHV1-45A0A0A0MS14 117 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 IGHV2-26A0A0B4J1V2 119 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 TRAV8-2A0A0B4J237 113 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 IGKV1-12A0A0C4DH73 117 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 DAPL1A0PJW8 107 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 TMEM114B3SHH9 223 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 PHYHO14832 338 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 TCAPO15273 167 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 PLCH2O75038 1416 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 PCF11O94913 1555 aaKnown RBP1.19□□□□□ -2.22
SSB-210ENST00000474273 IGKV1D-12P01611 117 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 ATP5G1P05496 136 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 GTF2F2P13984 249 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 NQO1P15559 274 aaKnown RBP1.19□□□□□ -2.22
SSB-210ENST00000474273 PTPRGP23470 1445 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 HSD11B1P28845 292 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 RPL12P30050 165 aaKnown RBP1.19□□□□□ -2.22
SSB-210ENST00000474273 MIPP30301 263 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 AP3S2P59780 193 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 CXCR4P61073 352 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 B2MP61769 119 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 AESQ08117 197 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 PPP1R1AQ13522 171 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 LRRC75BQ2VPJ9 315 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 ATP6AP1LQ52LC2 224 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 CST9Q5W186 159 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 THOC7Q6I9Y2 204 aaKnown RBP1.19□□□□□ -2.22
SSB-210ENST00000474273 KRTAP5-10Q6L8G5 202 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 C8orf74Q6P047 294 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 UGT2A3Q6UWM9 527 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 LRRN1Q6UXK5 716 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 DNMBPQ6XZF7 1577 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 SLC25A45Q8N413 288 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 YIPF7Q8N8F6 280 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 TMEM161BQ8NDZ6 487 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 OR52E4Q8NGH9 312 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 OR10D4PQ8NGN7 298 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 OR11L1Q8NGX0 322 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 OR6K3Q8NGY3 331 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 SPPL2BQ8TCT7 592 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 EEF1AKMT1Q8WVE0 214 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 PRG4Q92954 1404 aaPredicted RBP1.19□□□□□ -2.22
SSB-210ENST00000474273 APOBEC3DQ96AK3 386 aaPredicted RBP1.19□□□□□ -2.22
SSB-210ENST00000474273 TAMM41Q96BW9 452 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 TLCD1Q96CP7 247 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 DGCR14Q96DF8 476 aaKnown RBP1.19□□□□□ -2.22
SSB-210ENST00000474273 SLC25A44Q96H78 314 aaPredicted RBP1.19□□□□□ -2.22
SSB-210ENST00000474273 OR2M4Q96R27 311 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 OR52B2Q96RD2 323 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 TRPM6Q9BX84 2022 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 TSGA10Q9BZW7 698 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 OR51B6Q9H340 312 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 FAM206AQ9NX38 181 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 TRAPPC1Q9Y5R8 145 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 ADGRB3O60242 1522 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 ADAMTSL1Q8N6G6 1762 aa1.19□□□□□ -2.22
SSB-210ENST00000474273 RIMBP3CA6NJZ7 1639 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 RIMBP3BA6NNM3 1639 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 RIMBP3Q9UFD9 1639 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 GRIN2BQ13224 1484 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 SYNJ1O43426 1573 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 ERCC6L2Q5T890 1561 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 FHAD1B1AJZ9 1412 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 C9orf84Q5VXU9 1444 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 I3L4J1 428 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 UPK2O00526 184 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 PFDN6O15212 129 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 NSA2O95478 260 aaKnown RBP1.18□□□□□ -2.22
SSB-210ENST00000474273 PDYNP01213 254 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 ISG15P05161 165 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 CALB1P05937 261 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 HIST1H1EP10412 219 aaKnown RBP1.18□□□□□ -2.22
SSB-210ENST00000474273 F8A1P23610 371 aa1.18□□□□□ -2.22
SSB-210ENST00000474273 PRTN3P24158 256 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms