RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 MBLAC1A4D2B0 266 aaPredicted RBP6.19□□□□□ -1.42
GPNMB-209ENST00000474157 TMEM212A6NML5 194 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 F5H697 171 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 TMEM250H0YL14 139 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 C15orf65H3BRN8 121 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 M0QXV9 152 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 CDC42EP2O14613 210 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 HMGB3O15347 200 aaKnown RBP6.19□□□□□ -1.42
GPNMB-209ENST00000474157 NKX2-8O15522 239 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 XRCC2O43543 280 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 GPR137BO60478 399 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 DDAH2O95865 285 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 GPX1P07203 203 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 ZNF20P17024 532 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 FUT1P19526 365 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 ZFP36P26651 326 aaKnown RBP6.19□□□□□ -1.42
GPNMB-209ENST00000474157 HTR1DP28221 377 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 DRD3P35462 400 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 STC1P52823 247 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 RPL15P61313 204 aaKnown RBP6.19□□□□□ -1.42
GPNMB-209ENST00000474157 GRB2P62993 217 aaKnown RBP6.19□□□□□ -1.42
GPNMB-209ENST00000474157 EXOSC7Q15024 291 aaKnown RBP6.19□□□□□ -1.42
GPNMB-209ENST00000474157 CDSNQ15517 529 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 ZNF791Q3KP31 576 aaPredicted RBP6.19□□□□□ -1.42
GPNMB-209ENST00000474157 NRN1LQ496H8 165 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 OR10J3Q5JRS4 329 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 FAM162BQ5T6X4 162 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 CPTPQ5TA50 214 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 ZFAND6Q6FIF0 208 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 ZNF788Q6ZQV5 615 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 CYP2G1PQ6ZSU1 146 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 MOGAT3Q86VF5 341 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 CDC20BQ86Y33 519 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 OR10V1Q8NGI7 309 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 VSTM2AQ8TAG5 236 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 C2orf15Q8WU43 125 aaKnown RBP6.19□□□□□ -1.42
GPNMB-209ENST00000474157 PIGTQ969N2 578 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 DNAJC30Q96LL9 226 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 ANAPC13Q9BS18 74 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 GPR174Q9BXC1 333 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 C1QTNF4Q9BXJ3 329 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 STRADBQ9C0K7 418 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 WDR61Q9GZS3 305 aaKnown RBP6.19□□□□□ -1.42
GPNMB-209ENST00000474157 MS4A6AQ9H2W1 248 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 OR51I2Q9H344 312 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 NPVFQ9HCQ7 196 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 MANBALQ9NQG1 85 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 GPR84Q9NQS5 396 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 IL36GQ9NZH8 169 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 WASHC3Q9Y3C0 194 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 CSDC2Q9Y534 153 aaKnown RBP6.19□□□□□ -1.42
GPNMB-209ENST00000474157 ZNF780BQ9Y6R6 833 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 PLXND1Q9Y4D7 1925 aa6.19□□□□□ -1.42
GPNMB-209ENST00000474157 TRBV4-1A0A0J9YWV2 114 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 C13orf42A0A1B0GVH6 325 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 OOEPA6NGQ2 149 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 OR2T8A6NH00 312 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 DHHO43323 396 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 KRASP01116 189 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 CD3DP04234 171 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 EDN1P05305 212 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 PRDX3P30048 256 aaKnown RBP6.18□□□□□ -1.42
GPNMB-209ENST00000474157 ZNF93P35789 620 aaPredicted RBP6.18□□□□□ -1.42
GPNMB-209ENST00000474157 CDKN2AP42771 156 aaKnown RBP6.18□□□□□ -1.42
GPNMB-209ENST00000474157 CA7P43166 264 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 CXCL12P48061 93 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 ASCL1P50553 236 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 RPS28P62857 69 aaKnown RBP6.18□□□□□ -1.42
GPNMB-209ENST00000474157 PITX1P78337 314 aaPredicted RBP6.18□□□□□ -1.42
GPNMB-209ENST00000474157 LTBQ06643 244 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 PPP1R1AQ13522 171 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 ZXDCQ2QGD7 858 aaPredicted RBP6.18□□□□□ -1.42
GPNMB-209ENST00000474157 SLC25A53Q5H9E4 307 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 VAX1Q5SQQ9 334 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 TMEM78Q5T7P6 136 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 CST9LP1Q5W188 147 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 PAQR9Q6ZVX9 377 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 BHLHA9Q7RTU4 235 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 TMEM150AQ86TG1 271 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 WDR5BQ86VZ2 330 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 LRP11Q86VZ4 500 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 LRRC75A-AS1Q8N1F1 130 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 RYBPQ8N488 228 aaPredicted RBP6.18□□□□□ -1.42
GPNMB-209ENST00000474157 ZADH2Q8N4Q0 377 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 KRTCAP2Q8N6L1 136 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 CYB561D1Q8N8Q1 229 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 OR4F5Q8NH21 305 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 OR13C6PQ8NH95 151 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 RPS4Y2Q8TD47 263 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 SLC25A43Q8WUT9 341 aaPredicted RBP6.18□□□□□ -1.42
GPNMB-209ENST00000474157 BLNKQ8WV28 456 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 APOBEC4Q8WW27 367 aaKnown RBP6.18□□□□□ -1.42
GPNMB-209ENST00000474157 HMGB4Q8WW32 186 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 NEUROG1Q92886 237 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 RCHY1Q96PM5 261 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 UHRF2Q96PU4 802 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 GPER1Q99527 375 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 KRTAP4-12Q9BQ66 201 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 NDFIP1Q9BT67 221 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 RPP25Q9BUL9 199 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms