RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 CTF1Q16619 201 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 Q6ZPA2 131 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 Q6ZS49 121 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 OR2T10Q8NGZ9 312 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 NUDCD2Q8WVJ2 157 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 MAFIPQ8WZ33 124 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 ST6GALNAC6Q969X2 333 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 RDH8Q9NYR8 311 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 ELF5Q9UKW6 265 aaPredicted RBP11.02□□□□□ -0.65
USF1-205ENST00000473969 MOB4Q9Y3A3 225 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 NCBP2LA6PVI3 153 aaKnown RBP11.01□□□□□ -0.65
USF1-205ENST00000473969 XRCC3O43542 346 aa11.01□□□□□ -0.65
USF1-205ENST00000473969 ZNF182P17025 639 aaPredicted RBP11.01□□□□□ -0.65
USF1-205ENST00000473969 CBX5P45973 191 aa11.01□□□□□ -0.65
USF1-205ENST00000473969 IGSF11Q5DX21 431 aa11.01□□□□□ -0.65
USF1-205ENST00000473969 TMEM69Q5SWH9 247 aa11.01□□□□□ -0.65
USF1-205ENST00000473969 FAM71F2Q6NXP2 309 aa11.01□□□□□ -0.65
USF1-205ENST00000473969 RAB2BQ8WUD1 216 aa11.01□□□□□ -0.65
USF1-205ENST00000473969 CFHR4Q92496 578 aa11.01□□□□□ -0.65
USF1-205ENST00000473969 CMTM3Q96MX0 182 aa11.01□□□□□ -0.65
USF1-205ENST00000473969 C11orf54Q9H0W9 315 aaPredicted RBP11.01□□□□□ -0.65
USF1-205ENST00000473969 SAA2-SAA4A0A096LPE2 208 aa11□□□□□ -0.65
USF1-205ENST00000473969 FAM25AB3EWG3 89 aa11□□□□□ -0.65
USF1-205ENST00000473969 FAM25CB3EWG5 89 aa11□□□□□ -0.65
USF1-205ENST00000473969 FAM25GB3EWG6 89 aa11□□□□□ -0.65
USF1-205ENST00000473969 MOSP00540 346 aa11□□□□□ -0.65
USF1-205ENST00000473969 SAA2P0DJI9 122 aaPredicted RBP11□□□□□ -0.65
USF1-205ENST00000473969 GPR12P47775 334 aa11□□□□□ -0.65
USF1-205ENST00000473969 TMBIM6P55061 237 aa11□□□□□ -0.65
USF1-205ENST00000473969 ARPC4P59998 168 aa11□□□□□ -0.65
USF1-205ENST00000473969 ABCA11PQ4W5N1 156 aa11□□□□□ -0.65
USF1-205ENST00000473969 C9orf152Q5JTZ5 239 aa11□□□□□ -0.65
USF1-205ENST00000473969 BCL7BQ9BQE9 202 aa11□□□□□ -0.65
USF1-205ENST00000473969 CABLES2Q9BTV7 478 aa11□□□□□ -0.65
USF1-205ENST00000473969 AUNIPQ9H7T9 357 aa11□□□□□ -0.65
USF1-205ENST00000473969 RNF150Q9ULK6 438 aa11□□□□□ -0.65
USF1-205ENST00000473969 TRBV6-7A0A0A0MS04 114 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 IGKV1-6A0A0C4DH72 117 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 APOA1P02647 267 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 VSIG10L2P0DP72 767 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 VDAC2P45880 294 aaPredicted RBP10.99□□□□□ -0.65
USF1-205ENST00000473969 OR3A3P47888 321 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 PROK1P58294 105 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 BLCAPP62952 87 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 HABP2Q14520 560 aaPredicted RBP10.99□□□□□ -0.65
USF1-205ENST00000473969 HERPUD1Q15011 391 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 CNIH2Q6PI25 160 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 ZNF833PQ6ZTB9 187 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 OR8H1Q8NGG4 311 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 WFDC12Q8WWY7 111 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 ABHD14BQ96IU4 210 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 EAF1Q96JC9 268 aaPredicted RBP10.99□□□□□ -0.65
USF1-205ENST00000473969 MRPL20Q9BYC9 149 aaKnown RBP10.99□□□□□ -0.65
USF1-205ENST00000473969 IFI27L2Q9H2X8 130 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 ZNF702PQ9H963 129 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 IFT46Q9NQC8 304 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 MRPS7Q9Y2R9 242 aaKnown RBP10.99□□□□□ -0.65
USF1-205ENST00000473969 SIGLEC9Q9Y336 463 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 STAB1Q9NY15 2570 aa10.99□□□□□ -0.65
USF1-205ENST00000473969 CCDC160A6NGH7 325 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 FGF16O43320 207 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 OR8U9P0C7N5 309 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 MC5RP33032 325 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 TAS2R20P59543 309 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 LSAMPQ13449 338 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 EBI3Q14213 229 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 RPL39P5Q59GN2 51 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 ODF3L1Q8IXM7 274 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 Q8N2B8 174 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 BEST4Q8NFU0 473 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 OR8U1Q8NH10 309 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 RASL11BQ9BPW5 248 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 NABP2Q9BQ15 211 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 PARP12Q9H0J9 701 aaKnown RBP10.98□□□□□ -0.65
USF1-205ENST00000473969 ANXA10Q9UJ72 324 aa10.98□□□□□ -0.65
USF1-205ENST00000473969 H7C2Y5 167 aa10.97□□□□□ -0.65
USF1-205ENST00000473969 SSX5O60225 188 aa10.97□□□□□ -0.65
USF1-205ENST00000473969 HPGDSO60760 199 aa10.97□□□□□ -0.65
USF1-205ENST00000473969 EIF4EP06730 217 aaKnown RBP10.97□□□□□ -0.65
USF1-205ENST00000473969 PRSS3P35030 304 aa10.97□□□□□ -0.65
USF1-205ENST00000473969 HOGA1Q86XE5 327 aa10.97□□□□□ -0.65
USF1-205ENST00000473969 KLHDC1Q8N7A1 406 aa10.97□□□□□ -0.65
USF1-205ENST00000473969 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.97□□□□□ -0.65
USF1-205ENST00000473969 SGMS2Q8NHU3 365 aa10.97□□□□□ -0.65
USF1-205ENST00000473969 ZNF251Q9BRH9 671 aa10.97□□□□□ -0.65
USF1-205ENST00000473969 AGMATQ9BSE5 352 aa10.97□□□□□ -0.65
USF1-205ENST00000473969 TOLLIPQ9H0E2 274 aa10.97□□□□□ -0.65
USF1-205ENST00000473969 OR2D2Q9H210 308 aa10.97□□□□□ -0.65
USF1-205ENST00000473969 ADAM30Q9UKF2 790 aa10.97□□□□□ -0.65
USF1-205ENST00000473969 IGKV1D-8A0A087WSZ0 117 aa10.96□□□□□ -0.65
USF1-205ENST00000473969 OR5H14A6NHG9 310 aa10.96□□□□□ -0.65
USF1-205ENST00000473969 ZNF736B4DX44 427 aaPredicted RBP10.96□□□□□ -0.65
USF1-205ENST00000473969 M0R1X1 148 aa10.96□□□□□ -0.65
USF1-205ENST00000473969 RGS5O15539 181 aa10.96□□□□□ -0.65
USF1-205ENST00000473969 APOA2P02652 100 aa10.96□□□□□ -0.65
USF1-205ENST00000473969 LUMP51884 338 aaPredicted RBP10.96□□□□□ -0.65
USF1-205ENST00000473969 CBX3Q13185 183 aa10.96□□□□□ -0.65
USF1-205ENST00000473969 SPCS2Q15005 226 aa10.96□□□□□ -0.65
USF1-205ENST00000473969 H1FOOQ8IZA3 346 aaPredicted RBP10.96□□□□□ -0.65
USF1-205ENST00000473969 NECAP2Q9NVZ3 263 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms