RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 C11orf54Q9H0W9 315 aaPredicted RBP15.03■□□□□ -0
PTCD3-210ENST00000473829 IGKV1D-8A0A087WSZ0 117 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 TMEM235A6NFC5 223 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 ITGB1BP1O14713 200 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 HSPA12AO43301 675 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 FGF16O43320 207 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 MOSP00540 346 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 GSTT2P0CG29 244 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 GSTT2BP0CG30 244 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 SCAND1P57086 179 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 Q8N9W7 124 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 OR4A4PQ8NGN8 299 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 NUDCD2Q8WVJ2 157 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 CABLES2Q9BTV7 478 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 PLSCR3Q9NRY6 295 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 ETV7Q9Y603 341 aa15.02■□□□□ -0
PTCD3-210ENST00000473829 M0QZ24 198 aa15.01□□□□□ -0.01
PTCD3-210ENST00000473829 FBXO24O75426 580 aa15.01□□□□□ -0.01
PTCD3-210ENST00000473829 NCS1P62166 190 aa15.01□□□□□ -0.01
PTCD3-210ENST00000473829 ZNF260Q3ZCT1 412 aa15.01□□□□□ -0.01
PTCD3-210ENST00000473829 HACD4Q5VWC8 232 aa15.01□□□□□ -0.01
PTCD3-210ENST00000473829 C10orf99Q6UWK7 81 aa15.01□□□□□ -0.01
PTCD3-210ENST00000473829 TREML4Q6UXN2 200 aa15.01□□□□□ -0.01
PTCD3-210ENST00000473829 RDH8Q9NYR8 311 aa15.01□□□□□ -0.01
PTCD3-210ENST00000473829 NCBP2LA6PVI3 153 aaKnown RBP15□□□□□ -0.01
PTCD3-210ENST00000473829 RAB29O14966 203 aa15□□□□□ -0.01
PTCD3-210ENST00000473829 BET1O15155 118 aa15□□□□□ -0.01
PTCD3-210ENST00000473829 SSX5O60225 188 aa15□□□□□ -0.01
PTCD3-210ENST00000473829 PROP1O75360 226 aa15□□□□□ -0.01
PTCD3-210ENST00000473829 PEX14O75381 377 aa15□□□□□ -0.01
PTCD3-210ENST00000473829 F2RL1P55085 397 aa15□□□□□ -0.01
PTCD3-210ENST00000473829 KIR2DS1Q14954 304 aa15□□□□□ -0.01
PTCD3-210ENST00000473829 ARL6IP1Q15041 203 aa15□□□□□ -0.01
PTCD3-210ENST00000473829 FAM71F2Q6NXP2 309 aa15□□□□□ -0.01
PTCD3-210ENST00000473829 EDARADDQ8WWZ3 215 aa15□□□□□ -0.01
PTCD3-210ENST00000473829 RITA1Q96K30 269 aa15□□□□□ -0.01
PTCD3-210ENST00000473829 NAA50Q9GZZ1 169 aaKnown RBP15□□□□□ -0.01
PTCD3-210ENST00000473829 PIPOXQ9P0Z9 390 aa15□□□□□ -0.01
PTCD3-210ENST00000473829 TRBV6-7A0A0A0MS04 114 aa14.99□□□□□ -0.01
PTCD3-210ENST00000473829 SCGNO76038 276 aa14.99□□□□□ -0.01
PTCD3-210ENST00000473829 GSTP1P09211 210 aaKnown RBP14.99□□□□□ -0.01
PTCD3-210ENST00000473829 DTYMKP23919 212 aa14.99□□□□□ -0.01
PTCD3-210ENST00000473829 TALDO1P37837 337 aa14.99□□□□□ -0.01
PTCD3-210ENST00000473829 VBP1P61758 197 aa14.99□□□□□ -0.01
PTCD3-210ENST00000473829 Q6ZS49 121 aa14.99□□□□□ -0.01
PTCD3-210ENST00000473829 CITED2Q99967 270 aaPredicted RBP14.99□□□□□ -0.01
PTCD3-210ENST00000473829 TOLLIPQ9H0E2 274 aa14.99□□□□□ -0.01
PTCD3-210ENST00000473829 RNF150Q9ULK6 438 aa14.99□□□□□ -0.01
PTCD3-210ENST00000473829 SPATA2Q9UM82 520 aa14.99□□□□□ -0.01
PTCD3-210ENST00000473829 LINC01548A6NM66 108 aa14.98□□□□□ -0.01
PTCD3-210ENST00000473829 ADARB2-AS1A8MUL3 147 aa14.98□□□□□ -0.01
PTCD3-210ENST00000473829 CT45A6P0DMU7 189 aa14.98□□□□□ -0.01
PTCD3-210ENST00000473829 CT45A5P0DMU8 189 aa14.98□□□□□ -0.01
PTCD3-210ENST00000473829 CT45A7P0DMV0 189 aa14.98□□□□□ -0.01
PTCD3-210ENST00000473829 CNTFRP26992 372 aa14.98□□□□□ -0.01
PTCD3-210ENST00000473829 SERPINB10P48595 397 aa14.98□□□□□ -0.01
PTCD3-210ENST00000473829 SRSF7Q16629 238 aaKnown RBP eCLIP14.98□□□□□ -0.01
PTCD3-210ENST00000473829 C2orf68Q2NKX9 166 aa14.98□□□□□ -0.01
PTCD3-210ENST00000473829 TCTEX1D4Q5JR98 221 aa14.98□□□□□ -0.01
PTCD3-210ENST00000473829 FAM131AQ6UXB0 335 aa14.98□□□□□ -0.01
PTCD3-210ENST00000473829 GLDNQ6ZMI3 551 aaPredicted RBP14.98□□□□□ -0.01
PTCD3-210ENST00000473829 FAM71E2Q8N5Q1 922 aa14.98□□□□□ -0.01
PTCD3-210ENST00000473829 OR5AU1Q8NGC0 362 aa14.98□□□□□ -0.01
PTCD3-210ENST00000473829 NOL4LQ96MY1 436 aaPredicted RBP14.98□□□□□ -0.01
PTCD3-210ENST00000473829 S1PR3Q99500 378 aa14.98□□□□□ -0.01
PTCD3-210ENST00000473829 TRAV18A0A075B6X5 111 aa14.97□□□□□ -0.01
PTCD3-210ENST00000473829 IGHG2P01859 326 aa14.97□□□□□ -0.01
PTCD3-210ENST00000473829 LINC00205P59089 165 aa14.97□□□□□ -0.01
PTCD3-210ENST00000473829 CENPVQ7Z7K6 275 aaPredicted RBP14.97□□□□□ -0.01
PTCD3-210ENST00000473829 CROCCP3Q8IVE0 287 aa14.97□□□□□ -0.01
PTCD3-210ENST00000473829 OR10J5Q8NHC4 309 aa14.97□□□□□ -0.01
PTCD3-210ENST00000473829 SLC25A46Q96AG3 418 aa14.97□□□□□ -0.01
PTCD3-210ENST00000473829 C5orf30Q96GV9 206 aa14.97□□□□□ -0.01
PTCD3-210ENST00000473829 ST6GALNAC5Q9BVH7 336 aa14.97□□□□□ -0.01
PTCD3-210ENST00000473829 MRPS26Q9BYN8 205 aaKnown RBP14.97□□□□□ -0.01
PTCD3-210ENST00000473829 ABCG5Q9H222 651 aa14.97□□□□□ -0.01
PTCD3-210ENST00000473829 LIN7CQ9NUP9 197 aaKnown RBP14.97□□□□□ -0.01
PTCD3-210ENST00000473829 LINC00527Q9UJ94 153 aa14.97□□□□□ -0.01
PTCD3-210ENST00000473829 H0YJW9 148 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 TMEM127O75204 238 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 DIRAS3O95661 229 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 CSF1P09603 554 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 PTHLHP12272 177 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 GPR12P47775 334 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 GNG2P59768 71 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 ACTBP60709 375 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 CTF1Q16619 201 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 PNLIPRP3Q17RR3 467 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 NSUN5P1Q3KNT7 163 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 SLC35E3Q7Z769 313 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 DRAXINQ8NBI3 349 aaPredicted RBP14.96□□□□□ -0.01
PTCD3-210ENST00000473829 OR8H1Q8NGG4 311 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 HSPB9Q9BQS6 159 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 MMP27Q9H306 513 aa14.96□□□□□ -0.01
PTCD3-210ENST00000473829 A0A0A6YYH2 397 aa14.95□□□□□ -0.02
PTCD3-210ENST00000473829 A6NJ64 397 aa14.95□□□□□ -0.02
PTCD3-210ENST00000473829 GABARAPO95166 117 aa14.95□□□□□ -0.02
PTCD3-210ENST00000473829 TFAP2AP05549 437 aa14.95□□□□□ -0.02
PTCD3-210ENST00000473829 OR8U9P0C7N5 309 aa14.95□□□□□ -0.02
PTCD3-210ENST00000473829 ALDH3B2P48448 385 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms