RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 S1PR3Q99500 378 aa10.26□□□□□ -0.77
SHROOM3-204ENST00000473602 CITED2Q99967 270 aaPredicted RBP10.26□□□□□ -0.77
SHROOM3-204ENST00000473602 CENPOQ9BU64 300 aa10.26□□□□□ -0.77
SHROOM3-204ENST00000473602 ABCG5Q9H222 651 aa10.26□□□□□ -0.77
SHROOM3-204ENST00000473602 IFI27L2Q9H2X8 130 aa10.26□□□□□ -0.77
SHROOM3-204ENST00000473602 VCX3AQ9NNX9 186 aa10.26□□□□□ -0.77
SHROOM3-204ENST00000473602 SLC23A1Q9UHI7 598 aa10.26□□□□□ -0.77
SHROOM3-204ENST00000473602 KCNK7Q9Y2U2 307 aa10.26□□□□□ -0.77
SHROOM3-204ENST00000473602 COL7A1Q02388 2944 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 SH2D7A6NKC9 451 aaPredicted RBP10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 NCBP2LA6PVI3 153 aaKnown RBP10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 TRDCB7Z8K6 153 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 HSPA12AO43301 675 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 SCGNO76038 276 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 TNFAIP8O95379 198 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 SLC2A2P11168 524 aaPredicted RBP10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 CD36P16671 472 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 SERPINB10P48595 397 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 SCAND1P57086 179 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 KIR2DS1Q14954 304 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 MOGAT2Q3SYC2 334 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 TIMM50Q3ZCQ8 353 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 C11orf87Q6NUJ2 197 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 C5orf24Q7Z6I8 188 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 SLC35E3Q7Z769 313 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 Q8N9W7 124 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 OR4A4PQ8NGN8 299 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 NABP2Q9BQ15 211 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 CHCHD6Q9BRQ6 235 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 OR51E2Q9H255 320 aa10.25□□□□□ -0.77
SHROOM3-204ENST00000473602 A0A087WXM4 84 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 A0A0B4J203 849 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 PSMB11A5LHX3 300 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 ADARB2-AS1A8MUL3 147 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 ZNF736B4DX44 427 aaPredicted RBP10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 AP4M1O00189 453 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 ST8SIA5O15466 376 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 TMEM127O75204 238 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 FCGR3AP08637 254 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 SCTP09683 121 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 SRSF7Q16629 238 aaKnown RBP eCLIP10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 FOXB2Q5VYV0 432 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 SFXN4Q6P4A7 337 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 FAM71E2Q8N5Q1 922 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 COMMD1Q8N668 190 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 RASL11BQ9BPW5 248 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 AGMATQ9BSE5 352 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 GON7Q9BXV9 100 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 MRPL20Q9BYC9 149 aaKnown RBP10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 TOLLIPQ9H0E2 274 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 ATG5Q9H1Y0 275 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 PLSCR3Q9NRY6 295 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 OR1A1Q9P1Q5 309 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 DAPK2Q9UIK4 370 aa10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 TSSC4Q9Y5U2 329 aaPredicted RBP10.24□□□□□ -0.77
SHROOM3-204ENST00000473602 LOC100506127A0A0U1RQW1 187 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 SMIM30A4D0T7 59 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 OR5H14A6NHG9 310 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 FABP7O15540 132 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 GNB3P16520 340 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 SDC2P34741 201 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 CEACAM6P40199 344 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 GPR12P47775 334 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 OR3A3P47888 321 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 SLC35B1P78383 322 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 ARFRP1Q13795 201 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 TCTEX1D4Q5JR98 221 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 Q6ZS49 121 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 TSPAN14Q8NG11 270 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 R3HDM4Q96D70 268 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 ZNF251Q9BRH9 671 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 CABLES2Q9BTV7 478 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 ETV7Q9Y603 341 aa10.23□□□□□ -0.77
SHROOM3-204ENST00000473602 IGKV1-6A0A0C4DH72 117 aa10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 TCRBV4S1A1TA0A5B7 111 aa10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 DTYMKP23919 212 aa10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 MC5RP33032 325 aa10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 SOX6P35712 828 aa10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 TALDO1P37837 337 aa10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 ACTBP60709 375 aa10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 PITPNAQ00169 270 aa10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 MMDQ15546 238 aa10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 STPG2Q8N412 459 aa10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 LGALS14Q8TCE9 139 aa10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 PARP12Q9H0J9 701 aaKnown RBP10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 C11orf54Q9H0W9 315 aaPredicted RBP10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 ZNF221Q9UK13 617 aa10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 ZNF580Q9UK33 172 aa10.22□□□□□ -0.77
SHROOM3-204ENST00000473602 A0A075B6Q4 140 aa10.21□□□□□ -0.77
SHROOM3-204ENST00000473602 K7EIL1 84 aa10.21□□□□□ -0.77
SHROOM3-204ENST00000473602 NBR2O15453 112 aa10.21□□□□□ -0.77
SHROOM3-204ENST00000473602 RBBP9O75884 186 aa10.21□□□□□ -0.77
SHROOM3-204ENST00000473602 GSTP1P09211 210 aaKnown RBP10.21□□□□□ -0.77
SHROOM3-204ENST00000473602 PF4V1P10720 104 aa10.21□□□□□ -0.77
SHROOM3-204ENST00000473602 SLC6A1P30531 599 aa10.21□□□□□ -0.77
SHROOM3-204ENST00000473602 F2RL1P55085 397 aa10.21□□□□□ -0.77
SHROOM3-204ENST00000473602 MXD1Q05195 221 aa10.21□□□□□ -0.77
SHROOM3-204ENST00000473602 C10orf99Q6UWK7 81 aa10.21□□□□□ -0.77
SHROOM3-204ENST00000473602 CROCCP3Q8IVE0 287 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms