RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 H0YJW9 148 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 YPEL1O60688 119 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 CA2P00918 260 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 IFNA6P05013 189 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 EDN2P20800 178 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 PJVKQ0ZLH3 352 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 PSG5Q15238 335 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 SMN1Q16637 294 aaKnown RBP9.56□□□□□ -0.88
TRAF4-209ENST00000473421 AKIRIN2Q53H80 203 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 C6orf141Q5SZD1 244 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 DMKNQ6E0U4 476 aaPredicted RBP9.56□□□□□ -0.88
TRAF4-209ENST00000473421 DRAXINQ8NBI3 349 aaPredicted RBP9.56□□□□□ -0.88
TRAF4-209ENST00000473421 OR9G4Q8NGQ1 327 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 RHOXF1Q8NHV9 184 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 APH1BQ8WW43 257 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 YPEL2Q96QA6 119 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 S100A13Q99584 98 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 SELENOIQ9C0D9 397 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 JPT1Q9UK76 154 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 SELENOKQ9Y6D0 94 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 KIAA1109Q2LD37 5005 aa9.56□□□□□ -0.88
TRAF4-209ENST00000473421 DNAH10Q8IVF4 4471 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 TRBV5-5A0A0J9YX44 114 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 CD7P09564 240 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 MECP2P51608 486 aaKnown RBP9.55□□□□□ -0.88
TRAF4-209ENST00000473421 ALDH3A2P51648 485 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 PPP3R1P63098 170 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 HTD2P86397 168 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 RIPK1Q13546 671 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 PLGLAQ15195 96 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 TMEM30BQ3MIR4 351 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 TCTEX1D1Q8N7M0 179 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 ZFP41Q8N8Y5 198 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 LINC00476Q8WZB0 136 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 FAM46BQ96A09 425 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 Q96M66 194 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 SULT4A1Q9BR01 284 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 PAK1IP1Q9NWT1 392 aaPredicted RBP9.55□□□□□ -0.88
TRAF4-209ENST00000473421 METTL1Q9UBP6 276 aaKnown RBP9.55□□□□□ -0.88
TRAF4-209ENST00000473421 ERGIC3Q9Y282 383 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 CEPT1Q9Y6K0 416 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 KMT2AQ03164 3969 aa9.55□□□□□ -0.88
TRAF4-209ENST00000473421 OGG1O15527 345 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 ZNF780AO75290 641 aaPredicted RBP9.54□□□□□ -0.88
TRAF4-209ENST00000473421 IGKV1-16P04430 117 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 CD2P06729 351 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 MGMTP16455 207 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 FUT3P21217 361 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 EWSR1Q01844 656 aaKnown RBP eCLIP9.54□□□□□ -0.88
TRAF4-209ENST00000473421 TMEM267Q0VDI3 215 aaPredicted RBP9.54□□□□□ -0.88
TRAF4-209ENST00000473421 HMGN3Q15651 99 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 C1orf146Q5VVC0 180 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 RPL22L1Q6P5R6 122 aaKnown RBP9.54□□□□□ -0.88
TRAF4-209ENST00000473421 ZNF562Q6V9R5 426 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 JAGN1Q8N5M9 183 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 DEFB125Q8N687 156 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 GRPEL2Q8TAA5 225 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 PYDC1Q8WXC3 89 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 MRPL48Q96GC5 212 aaKnown RBP9.54□□□□□ -0.88
TRAF4-209ENST00000473421 OR14A2Q96R54 314 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 AGMATQ9BSE5 352 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 SPACA1Q9HBV2 294 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 RANGRFQ9HD47 186 aaPredicted RBP9.54□□□□□ -0.88
TRAF4-209ENST00000473421 MRPS18AQ9NVS2 196 aaKnown RBP9.54□□□□□ -0.88
TRAF4-209ENST00000473421 CHCHD3Q9NX63 227 aaKnown RBP9.54□□□□□ -0.88
TRAF4-209ENST00000473421 CLEC2DQ9UHP7 191 aa9.54□□□□□ -0.88
TRAF4-209ENST00000473421 TRBV5-7A0A0A0MS05 114 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 ZNF785A8K8V0 405 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 GPX5O75715 221 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 CRTAPO75718 401 aaPredicted RBP9.53□□□□□ -0.88
TRAF4-209ENST00000473421 TFAP2AP05549 437 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 GSTP1P09211 210 aaKnown RBP9.53□□□□□ -0.88
TRAF4-209ENST00000473421 FCGR1AP12314 374 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 FSTP19883 344 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 MRPL28Q13084 256 aaKnown RBP9.53□□□□□ -0.88
TRAF4-209ENST00000473421 FXYD3Q14802 87 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 RNLSQ5VYX0 342 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 OR10K2Q6IF99 312 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 PYHIN1Q6K0P9 492 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 TRAT1Q6PIZ9 186 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 CBR4Q8N4T8 237 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 OR2AK2Q8NG84 335 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 OR5AN1Q8NGI8 311 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 IL1F10Q8WWZ1 152 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 GHSRQ92847 366 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 FAAP24Q9BTP7 215 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 KCNK15Q9H427 330 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 SLA2Q9H6Q3 261 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 ZNF355PQ9NSJ1 428 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 KCNIP1Q9NZI2 227 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 GMPPBQ9Y5P6 360 aa9.53□□□□□ -0.88
TRAF4-209ENST00000473421 H0Y980 276 aa9.52□□□□□ -0.89
TRAF4-209ENST00000473421 H3BNX3 289 aa9.52□□□□□ -0.89
TRAF4-209ENST00000473421 H7C2Y5 167 aa9.52□□□□□ -0.89
TRAF4-209ENST00000473421 EBAG9O00559 213 aa9.52□□□□□ -0.89
TRAF4-209ENST00000473421 PDCD6O75340 191 aa9.52□□□□□ -0.89
TRAF4-209ENST00000473421 WBP4O75554 376 aaKnown RBP9.52□□□□□ -0.89
TRAF4-209ENST00000473421 LY6G6CO95867 125 aa9.52□□□□□ -0.89
TRAF4-209ENST00000473421 APELAP0DMC3 54 aa9.52□□□□□ -0.89
TRAF4-209ENST00000473421 ZP3P21754 424 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms