RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CA11O75493 328 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 CDRT1O95170 752 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 ARG1P05089 322 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 CSN2P05814 226 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 CALCBP10092 127 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 VPREB1P12018 145 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 MGMTP16455 207 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 IGFBP3P17936 291 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-208ENST00000469585 RAB3BP20337 219 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 GZMHP20718 246 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 FUT3P21217 361 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 ANOS1P23352 680 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 PRTN3P24158 256 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 NFYBP25208 207 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 BRS3P32247 399 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 TALDO1P37837 337 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 MNDAP41218 407 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 MAP2K4P45985 399 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 NPBWR2P48146 333 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 CEBPDP49716 269 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-208ENST00000469585 EMX1Q04741 257 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-208ENST00000469585 ATXN7L3Q14CW9 347 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-208ENST00000469585 KRTAP21-3Q3LHN1 58 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 TMEM30BQ3MIR4 351 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 XAF1Q6GPH4 301 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 METAP1DQ6UB28 335 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-208ENST00000469585 GDPGP1Q6ZNW5 385 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 TPRA1Q86W33 373 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 CROCCP3Q8IVE0 287 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 PHC2Q8IXK0 858 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 CD177Q8N6Q3 437 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 OR13C5Q8NGS8 318 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 OR10K1Q8NGX5 313 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 C22orf15Q8WYQ4 148 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 SEH1LQ96EE3 360 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 SLC6A7Q99884 636 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 ZNF649Q9BS31 505 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 RIMS4Q9H426 269 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-208ENST00000469585 SIRT7Q9NRC8 400 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 NDUFB11Q9NX14 153 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 STUB1Q9UNE7 303 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 POMT1Q9Y6A1 747 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 V9GY05 133 aa5.05□□□□□ -1.6
PTCD3-208ENST00000469585 DOCK11Q5JSL3 2073 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 C2CD3Q4AC94 2353 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 TRAV8-7A0A075B6U6 113 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 TEX13DA0A0J9YY54 714 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-208ENST00000469585 ODAMA1E959 279 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 C15orf62A8K5M9 175 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-208ENST00000469585 SLC33A1O00400 549 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-208ENST00000469585 LALBAP00709 142 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 GLAP06280 429 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 SFTPBP07988 381 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 UCHL1P09936 223 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 COX7A1P24310 79 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 HILS1P60008 231 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 RPS25P62851 125 aaKnown RBP5.04□□□□□ -1.6
PTCD3-208ENST00000469585 AESQ08117 197 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 PIGYQ3MUY2 71 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 NHLRC3Q5JS37 347 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 UBE2UQ5VVX9 321 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 RAB12Q6IQ22 244 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 C12orf54Q6X4T0 127 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 BRD3OSQ6XYD6 125 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 C9orf139Q6ZV77 190 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 MOB1BQ7L9L4 216 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 OR2W3Q7Z3T1 314 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 PDZD9Q8IXQ8 264 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 TMEM86BQ8N661 226 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 SIGLECL1Q8N7X8 197 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 SUMF2Q8NBJ7 301 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 LY6G5BQ8NDX9 201 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 OR56B1Q8NGI3 324 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 OR10X1Q8NGY0 326 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 SETD6Q8TBK2 473 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 RGP1Q92546 391 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-208ENST00000469585 FAM46BQ96A09 425 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 CLEC7AQ9BXN2 247 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 C19orf12Q9NSK7 152 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 GNG12Q9UBI6 72 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 ZNF222Q9UK12 451 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 LSM2Q9Y333 95 aaKnown RBP5.04□□□□□ -1.6
PTCD3-208ENST00000469585 TBL2Q9Y4P3 447 aaKnown RBP5.04□□□□□ -1.6
PTCD3-208ENST00000469585 MAB21L2Q9Y586 359 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 PEX16Q9Y5Y5 336 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 CELSR1Q9NYQ6 3014 aa5.04□□□□□ -1.6
PTCD3-208ENST00000469585 WNK2Q9Y3S1 2297 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 TRAV1-2A0A0B4J238 106 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 CENPVL3A0A0U1RRI6 287 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 A0A1B0GUS0 222 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 TRDV1A0A1B0GX56 115 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 LEUTXA8MZ59 168 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 SLC17A2O00624 439 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 GEMIN2O14893 280 aaKnown RBP5.03□□□□□ -1.6
PTCD3-208ENST00000469585 BUB3O43684 328 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 PDCD6O75340 191 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 TFAP2AP05549 437 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 CD3GP09693 182 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 IGHV1-8P0DP01 117 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms