RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ARRDC1Q8N5I2 433 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 OR5D18Q8NGL1 313 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 ARHGAP5-AS1Q96IT6 56 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 TM2D1Q9BX74 207 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 FAM96BQ9Y3D0 163 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 hCG_1809904A0A1W2PP81 198 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 A0A1W2PPE2 198 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 A0A1W2PR64 198 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 A0A1W2PRV1 198 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 SERPINA2P20848 420 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 IER3P46695 156 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 DLX1P56177 255 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 PDZK1IP1Q13113 114 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 HCP5Q6MZN7 132 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 C17orf107Q6ZR85 190 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 TMUB2Q71RG4 321 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 FAM58AQ8N1B3 248 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 OR5M8Q8NGP6 311 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 OR5H2Q8NGV7 314 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 SNX22Q96L94 193 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 ZNF747Q9BV97 191 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 RHOFQ9HBH0 211 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 ZNRD1Q9P1U0 126 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 CA11O75493 328 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 HAND1O96004 215 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 BCL3P20749 454 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 BLVRBP30043 206 aaPredicted RBP11.8□□□□□ -0.52
COL27A1-203ENST00000468565 NPBWR2P48146 333 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 PRB3Q04118 309 aaPredicted RBP11.8□□□□□ -0.52
COL27A1-203ENST00000468565 SRSF4Q08170 494 aaKnown RBP11.8□□□□□ -0.52
COL27A1-203ENST00000468565 ZNF146Q15072 292 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 SPIN3Q5JUX0 258 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 CRIP3Q6Q6R5 217 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 RTN4RL2Q86UN3 420 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 TMEM17Q86X19 198 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 HOGA1Q86XE5 327 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 SAXO1Q8IYX7 474 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 C11orf42Q8N5U0 333 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 DYRK2Q92630 601 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 MRGPRFQ96AM1 343 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 SCGB3A2Q96PL1 93 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 PHB2Q99623 299 aa11.8□□□□□ -0.52
COL27A1-203ENST00000468565 C9orf170A2RU37 121 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 FAM181BA6NEQ2 426 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 SERPINE3A8MV23 424 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 LEUTXA8MZ59 168 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 SPRY1O43609 319 aaPredicted RBP11.79□□□□□ -0.52
COL27A1-203ENST00000468565 CRYBA1P05813 215 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 RPA2P15927 270 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 SAA4P35542 130 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 TAS2R46P59540 309 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 PPP1R1AQ13522 171 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 ZNF273Q14593 569 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 MIDNQ504T8 468 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 LY6G6FQ5SQ64 297 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 TERB2Q8NHR7 220 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 LRRC20Q8TCA0 184 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 MITD1Q8WV92 249 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 PDCD10Q9BUL8 212 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 PECRQ9BY49 303 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 METTL9Q9H1A3 318 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 TNFRSF19Q9NS68 423 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 COMMD9Q9P000 198 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 GLS2Q9UI32 602 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 MMP24Q9Y5R2 645 aa11.79□□□□□ -0.52
COL27A1-203ENST00000468565 FOXI3A8MTJ6 420 aaPredicted RBP11.78□□□□□ -0.52
COL27A1-203ENST00000468565 CFDP00746 253 aaPredicted RBP11.78□□□□□ -0.52
COL27A1-203ENST00000468565 IGHV4-59P01825 116 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 TMEM225BP0DP42 221 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 PRKACAP17612 351 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 HLA-GP17693 338 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 OR10K1Q8NGX5 313 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 ARL6Q9H0F7 186 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 IL36RNQ9UBH0 155 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 IGKV1-12A0A0C4DH73 117 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 A0A1B0GUS0 222 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 RPS10-NUDT3A0A1W2PQS6 291 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 A0A1W2PRD5 423 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 A0A1W2PRF3 423 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 A0A1W2PRM7 423 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 C17orf98A8MV24 154 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 ANGPTL7O43827 346 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 NDUFA7O95182 113 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 IGKV1D-12P01611 117 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 RBP4P02753 201 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 CCL3L1P16619 93 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 AKR1C4P17516 323 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 DLX6P56179 175 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 ERVFRD-1P60508 538 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 MEF2CQ06413 473 aaPredicted RBP11.78□□□□□ -0.52
COL27A1-203ENST00000468565 PNKDQ8N490 385 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 ZSCAN4Q8NAM6 433 aaPredicted RBP11.78□□□□□ -0.52
COL27A1-203ENST00000468565 MARCH1Q8TCQ1 289 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 MFFQ9GZY8 342 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 KIAA2026Q5HYC2 2103 aa11.78□□□□□ -0.52
COL27A1-203ENST00000468565 DUS4LO95620 317 aaKnown RBP11.77□□□□□ -0.53
COL27A1-203ENST00000468565 EDDM3BP56851 147 aa11.77□□□□□ -0.53
COL27A1-203ENST00000468565 RSU1Q15404 277 aa11.77□□□□□ -0.53
COL27A1-203ENST00000468565 SHISA2Q6UWI4 295 aa11.77□□□□□ -0.53
COL27A1-203ENST00000468565 BEND2Q8NDZ0 799 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms