RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SOX6P35712 828 aa13.46□□□□□ -0.25
SSBP1-207ENST00000468267 CEACAM6P40199 344 aa13.46□□□□□ -0.25
SSBP1-207ENST00000468267 RPL23AP62750 156 aaKnown RBP13.46□□□□□ -0.25
SSBP1-207ENST00000468267 FAM71F2Q6NXP2 309 aa13.46□□□□□ -0.25
SSBP1-207ENST00000468267 FCGR1BQ92637 280 aa13.46□□□□□ -0.25
SSBP1-207ENST00000468267 RITA1Q96K30 269 aa13.46□□□□□ -0.25
SSBP1-207ENST00000468267 ZNF251Q9BRH9 671 aa13.46□□□□□ -0.25
SSBP1-207ENST00000468267 PARP12Q9H0J9 701 aaKnown RBP13.46□□□□□ -0.25
SSBP1-207ENST00000468267 ZFP57Q9NU63 452 aa13.46□□□□□ -0.25
SSBP1-207ENST00000468267 PIPOXQ9P0Z9 390 aa13.46□□□□□ -0.25
SSBP1-207ENST00000468267 KCNK7Q9Y2U2 307 aa13.46□□□□□ -0.25
SSBP1-207ENST00000468267 SCTP09683 121 aa13.45□□□□□ -0.26
SSBP1-207ENST00000468267 RAB6AP20340 208 aa13.45□□□□□ -0.26
SSBP1-207ENST00000468267 ZBTB25P24278 435 aa13.45□□□□□ -0.26
SSBP1-207ENST00000468267 MOGAT2Q3SYC2 334 aa13.45□□□□□ -0.26
SSBP1-207ENST00000468267 TEX38Q6PEX7 206 aa13.45□□□□□ -0.26
SSBP1-207ENST00000468267 NR2C2APQ86WQ0 139 aa13.45□□□□□ -0.26
SSBP1-207ENST00000468267 RAB3CQ96E17 227 aa13.45□□□□□ -0.26
SSBP1-207ENST00000468267 HSPB9Q9BQS6 159 aa13.45□□□□□ -0.26
SSBP1-207ENST00000468267 AGMATQ9BSE5 352 aa13.45□□□□□ -0.26
SSBP1-207ENST00000468267 GON7Q9BXV9 100 aa13.45□□□□□ -0.26
SSBP1-207ENST00000468267 C11orf54Q9H0W9 315 aaPredicted RBP13.45□□□□□ -0.26
SSBP1-207ENST00000468267 GHITMQ9H3K2 345 aa13.45□□□□□ -0.26
SSBP1-207ENST00000468267 OR1A1Q9P1Q5 309 aa13.45□□□□□ -0.26
SSBP1-207ENST00000468267 TRDCB7Z8K6 153 aa13.44□□□□□ -0.26
SSBP1-207ENST00000468267 HSPA12AO43301 675 aa13.44□□□□□ -0.26
SSBP1-207ENST00000468267 FGF9P31371 208 aaPredicted RBP13.44□□□□□ -0.26
SSBP1-207ENST00000468267 ACTBP60709 375 aa13.44□□□□□ -0.26
SSBP1-207ENST00000468267 MMDQ15546 238 aa13.44□□□□□ -0.26
SSBP1-207ENST00000468267 PNLIPRP3Q17RR3 467 aa13.44□□□□□ -0.26
SSBP1-207ENST00000468267 RPL39P5Q59GN2 51 aa13.44□□□□□ -0.26
SSBP1-207ENST00000468267 ZNF773Q6PK81 442 aa13.44□□□□□ -0.26
SSBP1-207ENST00000468267 OR10R2Q8NGX6 335 aa13.44□□□□□ -0.26
SSBP1-207ENST00000468267 EDARADDQ8WWZ3 215 aa13.44□□□□□ -0.26
SSBP1-207ENST00000468267 PTX4Q96A99 478 aa13.44□□□□□ -0.26
SSBP1-207ENST00000468267 PHF21AQ96BD5 680 aa13.44□□□□□ -0.26
SSBP1-207ENST00000468267 ABHD14BQ96IU4 210 aa13.44□□□□□ -0.26
SSBP1-207ENST00000468267 TXNL4BQ9NX01 149 aaKnown RBP13.44□□□□□ -0.26
SSBP1-207ENST00000468267 STUB1Q9UNE7 303 aa13.44□□□□□ -0.26
SSBP1-207ENST00000468267 A0A0B4J203 849 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 IGKV1-6A0A0C4DH72 117 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 RAB27BO00194 218 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 RRP9O43818 475 aaKnown RBP13.43□□□□□ -0.26
SSBP1-207ENST00000468267 IGF1P05019 195 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 CD3GP09693 182 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 CT45A6P0DMU7 189 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 CT45A5P0DMU8 189 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 CT45A7P0DMV0 189 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 IGLL1P15814 213 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 GADD45AP24522 165 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 CNTFRP26992 372 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 SLC6A1P30531 599 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 C18orf65Q6ZTR6 163 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 NPBQ8NG41 125 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 ZNF107Q9UII5 783 aaPredicted RBP13.43□□□□□ -0.26
SSBP1-207ENST00000468267 ZNF580Q9UK33 172 aa13.43□□□□□ -0.26
SSBP1-207ENST00000468267 METTL21EPA6NDL7 271 aa13.42□□□□□ -0.26
SSBP1-207ENST00000468267 NBR2O15453 112 aa13.42□□□□□ -0.26
SSBP1-207ENST00000468267 PRB2P02812 416 aaPredicted RBP13.42□□□□□ -0.26
SSBP1-207ENST00000468267 SLC2A2P11168 524 aaPredicted RBP13.42□□□□□ -0.26
SSBP1-207ENST00000468267 GNB3P16520 340 aa13.42□□□□□ -0.26
SSBP1-207ENST00000468267 MRPS15P82914 257 aaKnown RBP13.42□□□□□ -0.26
SSBP1-207ENST00000468267 CFHR3Q02985 330 aa13.42□□□□□ -0.26
SSBP1-207ENST00000468267 FOXE3Q13461 319 aa13.42□□□□□ -0.26
SSBP1-207ENST00000468267 FAM131AQ6UXB0 335 aa13.42□□□□□ -0.26
SSBP1-207ENST00000468267 ETV3LQ6ZN32 361 aa13.42□□□□□ -0.26
SSBP1-207ENST00000468267 REC114Q7Z4M0 266 aa13.42□□□□□ -0.26
SSBP1-207ENST00000468267 LINC00482Q8N8I6 264 aa13.42□□□□□ -0.26
SSBP1-207ENST00000468267 RNF152Q8N8N0 203 aa13.42□□□□□ -0.26
SSBP1-207ENST00000468267 OR4A4PQ8NGN8 299 aa13.42□□□□□ -0.26
SSBP1-207ENST00000468267 SMIM30A4D0T7 59 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 OR5H14A6NHG9 310 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 NOTOA8MTQ0 251 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 NUDT19A8MXV4 375 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 MFNGO00587 321 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 IGHG4P01861 327 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 HLA-DRB1P01911 266 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 ELANEP08246 267 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 FCGR3AP08637 254 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 HIST1H1DP16402 221 aaKnown RBP13.41□□□□□ -0.26
SSBP1-207ENST00000468267 MC5RP33032 325 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 THBS3P49746 956 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 C5orf64Q2M2E5 130 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 CXorf66Q5JRM2 361 aaPredicted RBP13.41□□□□□ -0.26
SSBP1-207ENST00000468267 TPRA1Q86W33 373 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 ZNF695Q8IW36 515 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 MRPL41Q8IXM3 137 aaKnown RBP13.41□□□□□ -0.26
SSBP1-207ENST00000468267 KLHL30-AS1Q8NEE0 82 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 RCC1LQ96I51 464 aaKnown RBP13.41□□□□□ -0.26
SSBP1-207ENST00000468267 CHCHD6Q9BRQ6 235 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 TOLLIPQ9H0E2 274 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 NECAP2Q9NVZ3 263 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 RNF150Q9ULK6 438 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 SSR3Q9UNL2 185 aa13.41□□□□□ -0.26
SSBP1-207ENST00000468267 A0A075B6Q4 140 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 H0YJW9 148 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 FABP7O15540 132 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 PROP1O75360 226 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 NDUFA3O95167 84 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 RPLP1P05386 114 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms