RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 MSI2Q96DH6 328 aaKnown RBP12.16□□□□□ -0.46
DDX56-208ENST00000467318 C18orf12Q96KH6 178 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 NMES1Q9C002 83 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 LPAR2Q9HBW0 351 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 C19orf12Q9NSK7 152 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 TRAPPC2LQ9UL33 140 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 GPR132Q9UNW8 380 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 UBE2J1Q9Y385 318 aaPredicted RBP12.16□□□□□ -0.46
DDX56-208ENST00000467318 ABCA2Q9BZC7 2435 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 ZANQ9Y493 2812 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 IGHV2-70DA0A0C4DH43 119 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 SMAD7O15105 426 aaKnown RBP12.16□□□□□ -0.46
DDX56-208ENST00000467318 BCL2L11O43521 198 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 SURF2Q15527 256 aaPredicted RBP12.16□□□□□ -0.46
DDX56-208ENST00000467318 ALKAL2Q6UX46 152 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 RTN4RL2Q86UN3 420 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 FAM185AQ8N0U4 392 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 MRPL30Q8TCC3 161 aaKnown RBP12.16□□□□□ -0.46
DDX56-208ENST00000467318 DYRK2Q92630 601 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 TMEM186Q96B77 213 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 CHMP1AQ9HD42 196 aaPredicted RBP12.16□□□□□ -0.46
DDX56-208ENST00000467318 MBNL3Q9NUK0 354 aaKnown RBP12.16□□□□□ -0.46
DDX56-208ENST00000467318 TAS2R3Q9NYW6 316 aa12.16□□□□□ -0.46
DDX56-208ENST00000467318 ACANP16112 2415 aa12.15□□□□□ -0.46
DDX56-208ENST00000467318 TGFAP01135 160 aa12.15□□□□□ -0.46
DDX56-208ENST00000467318 AKR1C4P17516 323 aa12.15□□□□□ -0.46
DDX56-208ENST00000467318 DTYMKP23919 212 aa12.15□□□□□ -0.46
DDX56-208ENST00000467318 FPR2P25090 351 aa12.15□□□□□ -0.46
DDX56-208ENST00000467318 TRAT1Q6PIZ9 186 aa12.15□□□□□ -0.46
DDX56-208ENST00000467318 MOB1BQ7L9L4 216 aa12.15□□□□□ -0.46
DDX56-208ENST00000467318 OVCH2Q7RTZ1 564 aa12.15□□□□□ -0.46
DDX56-208ENST00000467318 ST8SIA2Q92186 375 aa12.15□□□□□ -0.46
DDX56-208ENST00000467318 ZNF714Q96N38 554 aa12.15□□□□□ -0.46
DDX56-208ENST00000467318 MMP26Q9NRE1 261 aa12.15□□□□□ -0.46
DDX56-208ENST00000467318 HIF1ANQ9NWT6 349 aa12.15□□□□□ -0.46
DDX56-208ENST00000467318 DSCAML1Q8TD84 2053 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 hCG_1809904A0A1W2PP81 198 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 A0A1W2PPE2 198 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 A0A1W2PR64 198 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 A0A1W2PRV1 198 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 DBX1A6NMT0 343 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 ZNF728P0DKX0 622 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 FOSL1P15407 271 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 VAMP1P23763 118 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 PSMB6P28072 239 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 NUP62P37198 522 aaPredicted RBP12.14□□□□□ -0.47
DDX56-208ENST00000467318 DVL1P1P54792 670 aaPredicted RBP12.14□□□□□ -0.47
DDX56-208ENST00000467318 SRSF7Q16629 238 aaKnown RBP eCLIP12.14□□□□□ -0.47
DDX56-208ENST00000467318 ZNF880Q6PDB4 577 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 C1orf122Q6ZSJ8 110 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 MARCH1Q8TCQ1 289 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 PPP1R1CQ8WVI7 109 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 PCNPQ8WW12 178 aaKnown RBP12.14□□□□□ -0.47
DDX56-208ENST00000467318 MRGPRFQ96AM1 343 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 GAL3ST2Q9H3Q3 398 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 RAB18Q9NP72 206 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 RAB9BQ9NP90 201 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 INSIG2Q9Y5U4 225 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 ARHGAP32A7KAX9 2087 aa12.14□□□□□ -0.47
DDX56-208ENST00000467318 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.13□□□□□ -0.472e-7■■■□□ 18
DDX56-208ENST00000467318 C5orf51A6NDU8 294 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 ZNF729A6NN14 1252 aaPredicted RBP12.13□□□□□ -0.47
DDX56-208ENST00000467318 SFT2D2O95562 160 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 RBP4P02753 201 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 FGF2P09038 288 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 GLP1RP43220 463 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 ZNF273Q14593 569 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 KCTD9Q7L273 389 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 TCF23Q7RTU1 214 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 KIR3DL3Q8N743 410 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 OR13A1Q8NGR1 328 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 MRGPRDQ8TDS7 321 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 HDHD3Q9BSH5 251 aaPredicted RBP12.13□□□□□ -0.47
DDX56-208ENST00000467318 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 KCNIP1Q9NZI2 227 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 ZNF230Q9UIE0 474 aaPredicted RBP12.13□□□□□ -0.47
DDX56-208ENST00000467318 KPTNQ9Y664 436 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 MAST4O15021 2626 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 KIAA2026Q5HYC2 2103 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 KBTBD11-OT1A0A1B0GTJ5 212 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 FAM25EA8MYX2 175 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 M0R1W7 72 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 SPDEFO95238 335 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 FCGR3AP08637 254 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 CGB3P0DN86 165 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 CGB7P0DN87 165 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 CD99P14209 185 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 RCC1P18754 421 aaPredicted RBP12.13□□□□□ -0.47
DDX56-208ENST00000467318 PAX8Q06710 450 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 LHFPL1Q86WI0 220 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 ADAD2Q8NCV1 583 aaKnown RBP12.13□□□□□ -0.47
DDX56-208ENST00000467318 CASTOR1Q8WTX7 329 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 SEC22AQ96IW7 307 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 ARPC5LQ9BPX5 153 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 LINC00574Q9H8X3 128 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 Q9N2K0 584 aa12.13□□□□□ -0.47
DDX56-208ENST00000467318 TMA7Q9Y2S6 64 aaKnown RBP12.13□□□□□ -0.47
DDX56-208ENST00000467318 ABCA1O95477 2261 aa12.12□□□□□ -0.47
DDX56-208ENST00000467318 J3QLI3 93 aa12.12□□□□□ -0.47
DDX56-208ENST00000467318 KIR2DS4P43632 304 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms