RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 PARD6GQ9BYG4 376 aaPredicted RBP12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 BCL2L14Q9BZR8 327 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 GAR1Q9NY12 217 aaKnown RBP12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 MUC6Q6W4X9 2439 aa12.43□□□□□ -0.42
PRPF38B-204ENST00000467302 ZFP92A6NM28 416 aa12.43□□□□□ -0.42
PRPF38B-204ENST00000467302 LCN15Q6UWW0 184 aa12.43□□□□□ -0.42
PRPF38B-204ENST00000467302 ZNF497Q6ZNH5 498 aa12.43□□□□□ -0.42
PRPF38B-204ENST00000467302 MOB1BQ7L9L4 216 aa12.43□□□□□ -0.42
PRPF38B-204ENST00000467302 TRIB1Q96RU8 372 aa12.43□□□□□ -0.42
PRPF38B-204ENST00000467302 P2RX4Q99571 388 aa12.43□□□□□ -0.42
PRPF38B-204ENST00000467302 TRAV39A0A0B4J263 110 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 SEC14L6B5MCN3 397 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 J3QT63 122 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 CYB5R3P00387 301 aaPredicted RBP12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 CA6P23280 308 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 MDH2P40926 338 aaKnown RBP12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 ZADH2Q8N4Q0 377 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 SARAFQ96BY9 339 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 SDF2L1Q9HCN8 221 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 PPP1R3CQ9UQK1 317 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 DMXL1Q9Y485 3027 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 A0A1W2PR80 420 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 PHOX2AO14813 284 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 WISP2O76076 250 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 S100A2P29034 98 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 HBG1P69891 147 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 HBG2P69892 147 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 PMS2P11Q13670 270 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 IGFBP7Q16270 282 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 OR2T2Q6IF00 324 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 ABHD5Q8WTS1 349 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 FAM210BQ96KR6 192 aa12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 WDR61Q9GZS3 305 aaKnown RBP12.42□□□□□ -0.42
PRPF38B-204ENST00000467302 TRBV23-1A0A0A0MS06 115 aa12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 CLDN34H7C241 214 aa12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 SOD3P08294 240 aa12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 FGF8P55075 233 aaPredicted RBP12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 ERVK11-1P61568 191 aa12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 TMEM41BQ5BJD5 291 aa12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 OR2B11Q5JQS5 317 aa12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 IGFL3Q6UXB1 125 aa12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 ASCL5Q7RTU5 278 aa12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 MRGPRGQ86SM5 289 aa12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 C1orf87Q8N0U7 546 aa12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 HIST3H2BBQ8N257 126 aa12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 LIN7CQ9NUP9 197 aaKnown RBP12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 VAX2Q9UIW0 290 aa12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 FAM186AA6NE01 2351 aa12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 ZFHX2Q9C0A1 2572 aaPredicted RBP12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 URB1O60287 2271 aaKnown RBP12.41□□□□□ -0.42
PRPF38B-204ENST00000467302 ZNF729A6NN14 1252 aaPredicted RBP12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 OR2H2O95918 312 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 GFI1BQ5VTD9 330 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 FAM214BQ7L5A3 538 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 WDR86Q86TI4 376 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 MDP1Q86V88 176 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 GCNT2Q8N0V5 402 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 OR4C12Q96R67 309 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 MBNL3Q9NUK0 354 aaKnown RBP12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 RIF1Q5UIP0 2472 aaKnown RBP12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 MED12LQ86YW9 2145 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 TRBV24-1A0A075B6N3 115 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 ELOA3CA0A087WX78 387 aaPredicted RBP12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 TRGC1P0CF51 173 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 TGFBR3Q03167 851 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 CDPF1Q6NVV7 123 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 LILRB2Q8N423 598 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 PRR18Q8N4B5 295 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 FRZBQ92765 325 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 PINX1Q96BK5 328 aaKnown RBP12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 COL25A1Q9BXS0 654 aaPredicted RBP12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 OR51B6Q9H340 312 aa12.4□□□□□ -0.42
PRPF38B-204ENST00000467302 FAM90A26D6RGX4 464 aa12.39□□□□□ -0.43
PRPF38B-204ENST00000467302 PPP1R2P9O14990 202 aa12.39□□□□□ -0.43
PRPF38B-204ENST00000467302 TGOLN2O43493 480 aa12.39□□□□□ -0.43
PRPF38B-204ENST00000467302 NKX6-1P78426 367 aaPredicted RBP12.39□□□□□ -0.43
PRPF38B-204ENST00000467302 GUSBP1Q15486 140 aa12.39□□□□□ -0.43
PRPF38B-204ENST00000467302 WDR25Q64LD2 544 aaPredicted RBP12.39□□□□□ -0.43
PRPF38B-204ENST00000467302 TMEM14EPQ6UXP3 125 aa12.39□□□□□ -0.43
PRPF38B-204ENST00000467302 DRAM1Q8N682 238 aa12.39□□□□□ -0.43
PRPF38B-204ENST00000467302 OR10D4PQ8NGN7 298 aa12.39□□□□□ -0.43
PRPF38B-204ENST00000467302 TAF15Q92804 592 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRPF38B-204ENST00000467302 TRAPPC2LQ9UL33 140 aa12.39□□□□□ -0.43
PRPF38B-204ENST00000467302 WIPI2Q9Y4P8 454 aa12.39□□□□□ -0.43
PRPF38B-204ENST00000467302 MAP1LC3B2A6NCE7 125 aa12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 SIRPB1O00241 398 aa12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 WDR1O75083 606 aa12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 IGHV1-2P23083 117 aa12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 SPANXN5Q5MJ07 72 aa12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 SPATA46Q5T0L3 261 aa12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 CENPVQ7Z7K6 275 aaPredicted RBP12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 Q8IYB0 196 aa12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 FGFRL1Q8N441 504 aa12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 SSX3Q99909 188 aa12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 GPR61Q9BZJ8 451 aa12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 MAP1LC3BQ9GZQ8 125 aa12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 RBKSQ9H477 322 aa12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 KCNS2Q9ULS6 477 aa12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 ESPL1Q14674 2120 aa12.38□□□□□ -0.43
PRPF38B-204ENST00000467302 CEBPZOSA8MTT3 80 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms